RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 E7EQL1 145 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 WRBO00258 174 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 ITGB1BP1O14713 200 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 FGF2P09038 288 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 CGB3P0DN86 165 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 CGB7P0DN87 165 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 AKR1C2P52895 323 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 EDDM3BP56851 147 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 CCL8P80075 99 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 EFNB3Q15768 340 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 TMEM30BQ3MIR4 351 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 HSD17B10Q99714 261 aaKnown RBP15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 ARV1Q9H2C2 271 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 LYRM2Q9NU23 88 aaPredicted RBP15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 TLN1Q9Y490 2541 aaKnown RBP15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 A0A0G2JRQ6 117 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 NKX6-3A6NJ46 265 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 LGALS8O00214 317 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 ATXN7O15265 892 aaPredicted RBP15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 SIGLEC5O15389 551 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 SSSCA1O60232 199 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 APOBEC3AP31941 199 aaPredicted RBP15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 C5orf30Q96GV9 206 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 SAP30LQ9HAJ7 183 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 CALYQ9NYX4 217 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 GNG12Q9UBI6 72 aa15.68■□□□□ 0.1
SEMA3D-202ENST00000444867 PCNX1Q96RV3 2341 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 IGHV3-43A0A0B4J1X8 118 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 TRAV38-1A0A0B4J264 116 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 FAM90A27PA6NNH2 459 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 IGKV1-5P01602 117 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 IGHV3-43DP0DP04 118 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 EPHA1P21709 976 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 LPAR6P43657 344 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 EWSR1Q01844 656 aaKnown RBP eCLIP15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 MORN2Q502X0 79 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 ZNF808Q8N4W9 903 aaPredicted RBP15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 SAT2Q96F10 170 aaPredicted RBP15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 RAB40CQ96S21 281 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 AGMATQ9BSE5 352 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 MS4A5Q9H3V2 200 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 COA4Q9NYJ1 87 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 MMP24Q9Y5R2 645 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 CACNA1DQ01668 2161 aa15.67■□□□□ 0.1
SEMA3D-202ENST00000444867 ARID1AO14497 2285 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 TRGV10A0A0A0MS01 117 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 A8MXK9 166 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 NUDT19A8MXV4 375 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 CLDN1O95832 211 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 FAM157CP0CG43 387 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 LOXL3P58215 753 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 RPL30P62888 115 aaKnown RBP15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 BAXQ07812 192 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 FAM53AQ6NSI3 398 aaPredicted RBP15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 DEFB108BQ8NET1 73 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 SMIM3Q9BZL3 60 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 DYNLRB1Q9NP97 96 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 CACNG5Q9UF02 275 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 PSG11Q9UQ72 335 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 LAMP3Q9UQV4 416 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 RNF115Q9Y4L5 304 aa15.66■□□□□ 0.1
SEMA3D-202ENST00000444867 KIAA1324LA8MWY0 1029 aaPredicted RBP15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 B9A039 149 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 FAM90A26D6RGX4 464 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 GYPAP02724 150 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 GPR12P47775 334 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 CAV2P51636 162 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 ADORA2A-AS1P86434 159 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 TCTEX1D2Q8WW35 142 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 CORO2AQ92828 525 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 CCL13Q99616 98 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 MAGT1Q9H0U3 335 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 GAB2Q9UQC2 676 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 POLEQ07864 2286 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 KBTBD11-OT1A0A1B0GTJ5 212 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 IGSF23A1L1A6 192 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 FAM24AA6NFZ4 105 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 ZNF729A6NN14 1252 aaPredicted RBP15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 KRBOX1C9JBD0 128 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 TMEM178BH3BS89 294 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 SHOXO15266 292 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 ST8SIA5O15466 376 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 CHST1O43916 411 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 ZP3P21754 424 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 SULT1A2P50226 295 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 RAB7AP51149 207 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 RPL23AP62750 156 aaKnown RBP15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 NHLH2Q02577 135 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 C17orf58Q2M2W7 97 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 FGFRL1Q8N441 504 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 TMEM252Q8N6L7 170 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 CD300LFQ8TDQ1 290 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 BSCL2Q96G97 398 aaPredicted RBP15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 GINS3Q9BRX5 216 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 LINC00574Q9H8X3 128 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 LPAR3Q9UBY5 353 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 CLN8Q9UBY8 286 aa15.65■□□□□ 0.1
SEMA3D-202ENST00000444867 DEFB108AA8MXU0 73 aa15.64■□□□□ 0.09
SEMA3D-202ENST00000444867 SEC11BP0C7V7 166 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms