RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 THNSL2Q86YJ6 484 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 ODF3L1Q8IXM7 274 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 GVQW1Q8N7I0 195 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 CFHR4Q92496 578 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 GINS4Q9BRT9 223 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 IFI27L2Q9H2X8 130 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 GHITMQ9H3K2 345 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 ANXA10Q9UJ72 324 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 RNF150Q9ULK6 438 aa9.89□□□□□ -0.83
USP1-203ENST00000442679 SAA2-SAA4A0A096LPE2 208 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 IGHV3-72A0A0B4J1Y9 119 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 MEIS3P1A6NDR6 274 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 FAM90A9PA6NNJ1 464 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 CTDSP2O14595 271 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 RAB29O14966 203 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 TXNL1O43396 289 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 HLA-DQB1P01920 261 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 FCER2P06734 321 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 SNRNP70P08621 437 aaKnown RBP9.88□□□□□ -0.83
USP1-203ENST00000442679 CTXN2P0C2S0 81 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 SAA2P0DJI9 122 aaPredicted RBP9.88□□□□□ -0.83
USP1-203ENST00000442679 COMPP49747 757 aaPredicted RBP9.88□□□□□ -0.83
USP1-203ENST00000442679 HES1Q14469 280 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 Q6ZSV7 163 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 ZNF833PQ6ZTB9 187 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 BEST4Q8NFU0 473 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 OR4F5Q8NH21 305 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 ABHD14BQ96IU4 210 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 S1PR3Q99500 378 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 AGMATQ9BSE5 352 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 TOLLIPQ9H0E2 274 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 RBM38Q9H0Z9 239 aaKnown RBP9.88□□□□□ -0.83
USP1-203ENST00000442679 MIXL1Q9H2W2 232 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 BEX1Q9HBH7 125 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 PIPOXQ9P0Z9 390 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 RSL24D1Q9UHA3 163 aaKnown RBP9.88□□□□□ -0.83
USP1-203ENST00000442679 DNHD1Q96M86 4753 aa9.88□□□□□ -0.83
USP1-203ENST00000442679 ZNF701M0R085 212 aaPredicted RBP9.87□□□□□ -0.83
USP1-203ENST00000442679 OR2F2O95006 317 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 OR8U9P0C7N5 309 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 MDKP21741 143 aaPredicted RBP9.87□□□□□ -0.83
USP1-203ENST00000442679 CD1BP29016 333 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 GPR12P47775 334 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 ARPC4P59998 168 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 HABP2Q14520 560 aaPredicted RBP9.87□□□□□ -0.83
USP1-203ENST00000442679 HNF4GQ14541 408 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 FBLN7Q53RD9 439 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 AWAT1Q58HT5 328 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 RPL39P5Q59GN2 51 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 C12orf54Q6X4T0 127 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 SNX29P2Q8IUI4 249 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 H1FOOQ8IZA3 346 aaPredicted RBP9.87□□□□□ -0.83
USP1-203ENST00000442679 OR4C13Q8NGP0 309 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 OR8U1Q8NH10 309 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 SPATA3Q8NHX4 192 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 RBM14Q96PK6 669 aaKnown RBP9.87□□□□□ -0.83
USP1-203ENST00000442679 NPFFR1Q9GZQ6 430 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 SLIRPQ9GZT3 109 aaKnown RBP9.87□□□□□ -0.83
USP1-203ENST00000442679 IFT46Q9NQC8 304 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 EXTL2Q9UBQ6 330 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 ZNF221Q9UK13 617 aa9.87□□□□□ -0.83
USP1-203ENST00000442679 ZNF736B4DX44 427 aaPredicted RBP9.86□□□□□ -0.83
USP1-203ENST00000442679 TSPAN9O75954 239 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 IGKV1D-33P01593 117 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 IGKV1-33P01594 117 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 TMEM11P17152 192 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 FAM71F2Q6NXP2 309 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 C16orf82Q7Z2V1 217 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 LAX1Q8IWV1 398 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 OR2T10Q8NGZ9 312 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 MCFD2Q8NI22 146 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 AKR1E2Q96JD6 320 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 NABP2Q9BQ15 211 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 ZNF251Q9BRH9 671 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 SLC25A33Q9BSK2 321 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 MRPL20Q9BYC9 149 aaKnown RBP9.86□□□□□ -0.83
USP1-203ENST00000442679 C6orf62Q9GZU0 229 aaPredicted RBP9.86□□□□□ -0.83
USP1-203ENST00000442679 C16orf95Q9H693 158 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 SCPEP1Q9HB40 452 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 ADAM30Q9UKF2 790 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 RBM7Q9Y580 266 aaKnown RBP9.86□□□□□ -0.83
USP1-203ENST00000442679 MMP24Q9Y5R2 645 aa9.86□□□□□ -0.83
USP1-203ENST00000442679 A0A1B0GUS0 222 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 J3QRK9 145 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 TPPPO94811 219 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 MOSP00540 346 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 CT45A6P0DMU7 189 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 CT45A5P0DMU8 189 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 CT45A7P0DMV0 189 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 NFYAP23511 347 aaPredicted RBP9.85□□□□□ -0.83
USP1-203ENST00000442679 BLCAPP62952 87 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 LSAMPQ13449 338 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 EBI3Q14213 229 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 OR5AP2Q8NGF4 316 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 LINC01006Q8NI28 216 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 GPX8Q8TED1 209 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 SNAPC3Q92966 411 aa9.85□□□□□ -0.83
USP1-203ENST00000442679 EAF1Q96JC9 268 aaPredicted RBP9.85□□□□□ -0.83
USP1-203ENST00000442679 DCUN1D5Q9BTE7 237 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms