RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 RPLP1P05386 114 aaKnown RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 RCC1P18754 421 aaPredicted RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 BLVRBP30043 206 aaPredicted RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 SERPINB10P48595 397 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 RPS27AP62979 156 aaKnown RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 RUNX1Q01196 453 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 HMGN3Q15651 99 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 C6orf141Q5SZD1 244 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 C10orf99Q6UWK7 81 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 ETV3LQ6ZN32 361 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 ZNF833PQ6ZTB9 187 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 ZNF429Q86V71 674 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 FAM71E2Q8N5Q1 922 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 NPBQ8NG41 125 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 OR1N2Q8NGR9 330 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 SETD6Q8TBK2 473 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 MRPL30Q8TCC3 161 aaKnown RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 FBLIM1Q8WUP2 373 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 FLYWCH2Q96CP2 140 aaKnown RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 WWC2-AS2Q96NR7 200 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 TSNAXQ99598 290 aaKnown RBP6.1□□□□□ -1.43
CD44-211ENST00000442151 NABP2Q9BQ15 211 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 SLC23A1Q9UHI7 598 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 ZNF221Q9UK13 617 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 HSF4Q9ULV5 492 aa6.1□□□□□ -1.43
CD44-211ENST00000442151 VWFP04275 2813 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 TRBV6-6A0A0A6YYG2 114 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 TRAV41A0A0B4J266 112 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 WI2-2373I1.2A0A1W2PRP0 233 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 PTGES3LE9PB15 166 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 PDCD5O14737 125 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 PSMB8P28062 276 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 CHATP28329 748 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 HOXD3P31249 432 aaPredicted RBP6.09□□□□□ -1.43
CD44-211ENST00000442151 ZNF134P52741 427 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 KRTAP10-11P60412 298 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 ZNF616Q08AN1 781 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 ARL6IP1Q15041 203 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 MED22Q15528 200 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 C5orf64Q2M2E5 130 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 UTF1Q5T230 341 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 OR52L2PQ8NGH6 319 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 UBALD1Q8TB05 177 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 IL1F10Q8WWZ1 152 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 FAM46BQ96A09 425 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 ORAI1Q96D31 301 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 RAX2Q96IS3 184 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 TMEM68Q96MH6 324 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 FAAP24Q9BTP7 215 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 TMED9Q9BVK6 235 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 PLGRKTQ9HBL7 147 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 FKBP14Q9NWM8 211 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 WASHC3Q9Y3C0 194 aa6.09□□□□□ -1.43
CD44-211ENST00000442151 H7C2Y5 167 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 SLC22A1O15245 554 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 SLC31A2O15432 143 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 APOA2P02652 100 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 CD37P11049 281 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 ARSBP15848 533 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 PPP1CCP36873 323 aaKnown RBP6.09□□□□□ -1.44
CD44-211ENST00000442151 VHLP40337 213 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 ECI1P42126 302 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 RAB9AP51151 201 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 F2RL1P55085 397 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 TPBGQ13641 420 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 P2RY14Q15391 338 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 LYPD6Q86Y78 171 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 ZNF491Q8N8L2 437 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 OR11H1Q8NG94 326 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 OR56B1Q8NGI3 324 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 OR6Q1Q8NGQ2 317 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 ELOVL1Q9BW60 279 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 SLA2Q9H6Q3 261 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 ACOT13Q9NPJ3 140 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 PARP11Q9NR21 331 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 BLOC1S6Q9UL45 172 aa6.09□□□□□ -1.44
CD44-211ENST00000442151 SLC17A2O00624 439 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 RRHO14718 337 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 RGS10O43665 173 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 NDUFA3O95167 84 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 SPDEFO95238 335 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 UCHL1P09936 223 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 RRASP10301 218 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 MYF6P23409 242 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 GADD45AP24522 165 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 CEACAM6P40199 344 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 HSPA13P48723 471 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 CFHR3Q02985 330 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 RAB11BQ15907 218 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 SSX1Q16384 188 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 TATDN3Q17R31 274 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 MOGAT2Q3SYC2 334 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 AKIRIN2Q53H80 203 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 SIGIRRQ6IA17 410 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 ZNF880Q6PDB4 577 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 CD200R1LQ6Q8B3 271 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 LRRTM1Q86UE6 522 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.08□□□□□ -1.44
CD44-211ENST00000442151 ABHD5Q8WTS1 349 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 CMSS1Q9BQ75 279 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms