RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 PHOX2AO14813 284 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 OR7C1O76099 320 aaPredicted RBP5.3□□□□□ -1.56
PUM1-207ENST00000440538 IGHV3-13P01766 116 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 IGHV3-7P01780 117 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 OMGP23515 440 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 CDX1P47902 265 aaPredicted RBP5.3□□□□□ -1.56
PUM1-207ENST00000440538 ZNF133P52736 654 aaPredicted RBP5.3□□□□□ -1.56
PUM1-207ENST00000440538 KISS1Q15726 138 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 ADIPOQQ15848 244 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 CLEC12BQ2HXU8 276 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 C5orf24Q7Z6I8 188 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 LYPD6Q86Y78 171 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 TPRX1Q8N7U7 411 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 OR5H2Q8NGV7 314 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 RDH5Q92781 318 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 C1QTNF5Q9BXJ0 243 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 RAB18Q9NP72 206 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.3□□□□□ -1.563e-7■■■■□ 21.2
PUM1-207ENST00000440538 C19orf12Q9NSK7 152 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 C1orf123Q9NWV4 160 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 UNC79Q9P2D8 2635 aa5.3□□□□□ -1.56
PUM1-207ENST00000440538 hCG_38984A0A1B0GV85 526 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 DEFB108AA8MXU0 73 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 RPS2P15880 293 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BCP62807 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 TFF3Q07654 80 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 EDDM3AQ14507 147 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST2H2BEQ16778 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 C1orf100Q5SVJ3 147 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BHQ93079 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 TOMM40LQ969M1 308 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BNQ99877 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H2BMQ99879 126 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 GFOD1Q9NXC2 390 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 MRPS28Q9Y2Q9 187 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 SETD2Q9BYW2 2564 aaPredicted RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 SIRPB1O00241 398 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 TMEM127O75204 238 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SRSF10O75494 262 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 NXPH2O95156 264 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 RBP2P50120 134 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST1H3AP68431 136 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 IL15RAQ13261 267 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HIST2H3PS2Q5TEC6 136 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 GGNBP1Q5YKI7 109 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 Q6ZR03 302 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 RAB39BQ96DA2 213 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 GPHA2Q96T91 129 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SSX3Q99909 188 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SPOCK3Q9BQ16 436 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 REPIN1Q9BWE0 567 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 SAP30LQ9HAJ7 183 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 JKAMPQ9P055 326 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 NAV3Q8IVL0 2385 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 FBN2P35556 2912 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 MALRD1Q5VYJ5 2156 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SHISA9B4DS77 424 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 DDTP30046 118 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 GLRXP35754 106 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SSX2Q16385 188 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 PIGYQ3MUY2 71 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 LYZL2Q7Z4W2 148 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 PPP1R3CQ9UQK1 317 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 CELSR1Q9NYQ6 3014 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 TEP1Q99973 2627 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 JMJD1CQ15652 2540 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 H3BQ15 152 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 GEMIN2O14893 280 aaKnown RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 SLC31A2O15432 143 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 MLNRO43193 412 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 MBPP02686 304 aaPredicted RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 LYL1P12980 280 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 FXYD4P59646 89 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SSTP61278 116 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SOHLH1Q5JUK2 328 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 FAHD2BQ6P2I3 314 aaPredicted RBP5.29□□□□□ -1.56
PUM1-207ENST00000440538 FDX2Q6P4F2 183 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SUMF2Q8NBJ7 301 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 OR51T1Q8NGJ9 327 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 OR52M1Q8NGK5 317 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 ABHD5Q8WTS1 349 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 FRZBQ92765 325 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 FAHD2AQ96GK7 314 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 SLC35B3Q9H1N7 401 aa5.29□□□□□ -1.56
PUM1-207ENST00000440538 VPS13CQ709C8 3753 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 NBPF19A0A087WUL8 3843 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 ZANQ9Y493 2812 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 ARFGEF3Q5TH69 2177 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 IGKV1-27A0A075B6S5 117 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 A6NNC1 897 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 IGLV1-44P01699 117 aa5.28□□□□□ -1.56
PUM1-207ENST00000440538 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms