RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 GNG10P50151 68 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF134P52741 427 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF645Q8N7E2 425 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 ZDHHC22Q8N966 263 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 OR4P4Q8NGL7 312 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 OR13C8Q8NGS7 320 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 NANPQ8TBE9 248 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 LEAP2Q969E1 77 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 S1PR3Q99500 378 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 SLC5A7Q9GZV3 580 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 DPAGT1Q9H3H5 408 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
SCLT1-202ENST00000439369 IGKV1D-13A0A0B4J2D9 117 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 FAM240BA0A1B0GVZ2 78 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 OR5H14A6NHG9 310 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 A8MV72 311 aaPredicted RBP10.31□□□□□ -0.76
SCLT1-202ENST00000439369 LEUTXA8MZ59 168 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 BUB1B-PAK6H3BSN5 160 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 NPFFO15130 113 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 SLC31A2O15432 143 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 ARG1P05089 322 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 IGKV1-13P0DP09 117 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 HNF1AP20823 631 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 GPR12P47775 334 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 LGALS4P56470 323 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 FXYD4P59646 89 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 KLRD1Q13241 179 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 UTF1Q5T230 341 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 FAM53AQ6NSI3 398 aaPredicted RBP10.31□□□□□ -0.76
SCLT1-202ENST00000439369 C1orf229Q6ZS94 237 aaPredicted RBP10.31□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 CMTM1Q8IZ96 169 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 BVESQ8NE79 360 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 DUSP18Q8NEJ0 188 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 ENKURQ8TC29 256 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 SECTM1Q8WVN6 248 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 ST6GALNAC6Q969X2 333 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 MRGPRFQ96AM1 343 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 OR2D2Q9H210 308 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 DPM3Q9P2X0 92 aa10.31□□□□□ -0.76
SCLT1-202ENST00000439369 ARHGAP32A7KAX9 2087 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 TRAV40A0A0B4J280 105 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 GPR31O00270 319 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 AVPP01185 164 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 CTSDP07339 412 aaPredicted RBP10.3□□□□□ -0.76
SCLT1-202ENST00000439369 PGAM2P15259 253 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 EPHA1P21709 976 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 RND3P61587 244 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 TAGLNQ01995 201 aaKnown RBP10.3□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF816Q0VGE8 651 aaPredicted RBP10.3□□□□□ -0.76
SCLT1-202ENST00000439369 RGS21Q2M5E4 152 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
SCLT1-202ENST00000439369 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 LYG1Q8N1E2 194 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 MARCH1Q8TCQ1 289 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 TOMM40LQ969M1 308 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 MALSU1Q96EH3 234 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 ADTRPQ96IZ2 230 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 NUP50Q9UKX7 468 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 GPR132Q9UNW8 380 aa10.3□□□□□ -0.76
SCLT1-202ENST00000439369 C14orf166Q9Y224 244 aaKnown RBP10.3□□□□□ -0.76
SCLT1-202ENST00000439369 SAA2-SAA4A0A096LPE2 208 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 A0A1W2PPE3 182 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 RNF212BA8MTL3 300 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 B3GALNT1O75752 331 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 IGHV3-7P01780 117 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 GAPDHP04406 335 aaKnown RBP10.29□□□□□ -0.76
SCLT1-202ENST00000439369 TCRBP04435 133 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 SAA2P0DJI9 122 aaPredicted RBP10.29□□□□□ -0.76
SCLT1-202ENST00000439369 GNRHRP30968 328 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 SAA4P35542 130 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 CCR6P51684 374 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 ARHGDIBP52566 201 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 RAG2P55895 527 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 DLX1P56177 255 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 UBE2MP61081 183 aaKnown RBP10.29□□□□□ -0.76
SCLT1-202ENST00000439369 SCGB2A2Q13296 93 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF66Q6ZN08 573 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 LDLRAD3Q86YD5 345 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 OR8H3Q8N146 312 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 CCDC71LQ8N9Z2 235 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 MINDY2Q8NBR6 621 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 ABHD14BQ96IU4 210 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 HSD17B10Q99714 261 aaKnown RBP10.29□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF251Q9BRH9 671 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 YAE1D1Q9NRH1 226 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 CCL28Q9NRJ3 127 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 SDHAF2Q9NX18 166 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 NUBP2Q9Y5Y2 271 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 MED13LQ71F56 2210 aa10.29□□□□□ -0.76
SCLT1-202ENST00000439369 LY6G6DO95868 133 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms