RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 A0A1W2PPE3 182 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 IGLV2-14P01704 120 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 OR4E1P0C645 316 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 RND3P61587 244 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 DHODHQ02127 395 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 PHLDA2Q53GA4 152 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 ABHD12Q8N2K0 398 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 LINC00311Q8N616 119 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 CCDC71LQ8N9Z2 235 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 ZBTB34Q8NCN2 500 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 ZNF596Q8TC21 504 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 ABHD14BQ96IU4 210 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 SIRPDQ9H106 197 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 GHITMQ9H3K2 345 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 UNKLQ9H9P5 680 aaKnown RBP18.8■□□□□ 0.6
CPSF4-204ENST00000436336 WNK2Q9Y3S1 2297 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 J3QR06 171 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 S100GP29377 79 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 DRAM1Q8N682 238 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 TNFRSF14Q92956 283 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 ZNF221Q9UK13 617 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 GAB2Q9UQC2 676 aa18.8■□□□□ 0.6
CPSF4-204ENST00000436336 IGHV2-26A0A0B4J1V2 119 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 GPR12P47775 334 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 C4orf46Q504U0 113 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 LINC01356Q8N9X3 169 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 WFDC11Q8NEX6 87 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 OR13D1Q8NGV5 346 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 RTN4IP1Q8WWV3 396 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-204ENST00000436336 CLEC7AQ9BXN2 247 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 GPN1Q9HCN4 374 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-204ENST00000436336 SIRT7Q9NRC8 400 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 PIPOXQ9P0Z9 390 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 ALG5Q9Y673 324 aa18.79■□□□□ 0.6
CPSF4-204ENST00000436336 C7orf66A4D0T2 115 aa18.78■□□□□ 0.6
CPSF4-204ENST00000436336 VMO1Q7Z5L0 202 aa18.78■□□□□ 0.6
CPSF4-204ENST00000436336 SGPP2Q8IWX5 399 aa18.78■□□□□ 0.6
CPSF4-204ENST00000436336 HEXA-AS1Q9H8Q6 139 aa18.78■□□□□ 0.6
CPSF4-204ENST00000436336 TRAV20A0A0B4J274 112 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 CRYM-AS1A6NIL9 109 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 TOR1AO14656 332 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 RAB29O14966 203 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 TOX4O94842 621 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 MMP9P14780 707 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 DLX1P56177 255 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 PAX8Q06710 450 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 PPP1R1AQ13522 171 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 LYG1Q8N1E2 194 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.77■□□□□ 0.6
CPSF4-204ENST00000436336 SEC22CQ9BRL7 303 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 SDHAF2Q9NX18 166 aa18.77■□□□□ 0.6
CPSF4-204ENST00000436336 A0A0A6YYJ9 748 aa18.77■□□□□ 0.59
CPSF4-204ENST00000436336 HLA-AP01891 365 aaKnown RBP18.77■□□□□ 0.59
CPSF4-204ENST00000436336 PRRX1P54821 245 aa18.77■□□□□ 0.59
CPSF4-204ENST00000436336 C11orf88Q6PI97 169 aa18.77■□□□□ 0.59
CPSF4-204ENST00000436336 LYG2Q86SG7 212 aa18.77■□□□□ 0.59
CPSF4-204ENST00000436336 ODF3L1Q8IXM7 274 aa18.77■□□□□ 0.59
CPSF4-204ENST00000436336 MAPK1IP1LQ8NDC0 245 aa18.77■□□□□ 0.59
CPSF4-204ENST00000436336 hCG_2014768A0A024R1R8 64 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 TEX13DA0A0J9YY54 714 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-204ENST00000436336 SNRPGP15A8MWD9 76 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 MPPED1O15442 326 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 PGLYRP1O75594 196 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-204ENST00000436336 VAMP1P23763 118 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 COX7A1P24310 79 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 SUPT4H1P63272 117 aaKnown RBP18.76■□□□□ 0.59
CPSF4-204ENST00000436336 DHRS2Q13268 280 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 DCAF12L2Q5VW00 463 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 TBC1D26Q86UD7 250 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 PNKDQ8N490 385 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 BEND2Q8NDZ0 799 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 OR11H6Q8NGC7 330 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 C5orf30Q96GV9 206 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 NAA60Q9H7X0 242 aa18.76■□□□□ 0.59
CPSF4-204ENST00000436336 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.76■□□□□ 0.596e-9■■■■□ 22.8
CPSF4-204ENST00000436336 SAA2-SAA4A0A096LPE2 208 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 C9orf170A2RU37 121 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 TNFSF12O43508 249 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 IGLV1-47P01700 117 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 SAA2P0DJI9 122 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-204ENST00000436336 GATA3P23771 443 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 CBX3Q13185 183 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 TMEM249Q2WGJ8 235 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 NCR3LG1Q68D85 454 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 ZNF626Q68DY1 528 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 OR52B4Q8NGK2 314 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 OR10X1Q8NGY0 326 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 ZNF431Q8TF32 576 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-204ENST00000436336 TMEM186Q96B77 213 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 PCGF1Q9BSM1 259 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 KCNIP3Q9Y2W7 256 aa18.75■□□□□ 0.59
CPSF4-204ENST00000436336 CREBL2O60519 120 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-204ENST00000436336 SFT2D2O95562 160 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 GZMKP49863 264 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 PRB3Q04118 309 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-204ENST00000436336 EIF4EBP1Q13541 118 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-204ENST00000436336 HLA-DRB5Q30154 266 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 KCTD9Q7L273 389 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 GALNT14Q96FL9 552 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 TBX15Q96SF7 602 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms