RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PSG2P11465 335 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
CTNND1-208ENST00000428599 MIA3Q5JRA6 1907 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 KIF13BQ9NQT8 1826 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 LOC105371242A0A075B767 164 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 CGB1A6NKQ9 187 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 H7C2G1 150 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 HRKO00198 91 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 PIGYQ3MUY2 71 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 PGLYRP3Q96LB9 341 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 C17orf51A8MQB3 221 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 NPFFO15130 113 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 SOCS1O15524 211 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 ST3GAL2Q16842 350 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 EEF1AKMT3Q96AZ1 226 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 AKIP1Q9NQ31 210 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 IL19Q9UHD0 177 aa7.77□□□□□ -1.17
CTNND1-208ENST00000428599 PPIAL4CA0A0B4J2A2 164 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 TCRBV16S1A1N1A0A5B0 115 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 DLL1O00548 723 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 THY1P04216 161 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 CD74P04233 296 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 PPIAL4GP0DN37 164 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 IER3P46695 156 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 NMUP48645 174 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 COMPP49747 757 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 RPS20P60866 119 aaKnown RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 MRGPRGQ86SM5 289 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 LHFPL5Q8TAF8 219 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM101Q96IK0 257 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 CHST5Q9GZS9 411 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 DPH3P1Q9H4G8 78 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 TMEFF2Q9UIK5 374 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 SELENOTP62341 195 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 HSPB7Q9UBY9 170 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 HYAL3O43820 417 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 PSG6Q00889 435 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 DCAF12L2Q5VW00 463 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 DYRK2Q92630 601 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 WNT2BQ93097 391 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 FOXD3Q9UJU5 478 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 LOC285556D6RIA3 1793 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 CACNA1CQ13936 2221 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 IGHV3-72A0A0B4J1Y9 119 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 FAM74A7A6NL05 159 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 SNURFLB1AK76 121 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 NKX2-8O15522 239 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 CDS2O95674 445 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 NUDT3O95989 172 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 GPX1P07203 203 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM50BP56557 158 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 CACNG7P62955 275 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 SLC25A53Q5H9E4 307 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 DPPA3Q6W0C5 159 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 OR10AC1Q8NH08 325 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 NPVFQ9HCQ7 196 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 PILRBQ9UKJ0 227 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 BRCA1P38398 1863 aaKnown RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 RBFOX2O43251 390 aaKnown RBP eCLIP7.76□□□□□ -1.174e-7■■■■□ 19.5
CTNND1-208ENST00000428599 CX3CL1P78423 397 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 ITLN1Q8WWA0 313 aa7.76□□□□□ -1.17
CTNND1-208ENST00000428599 ALKBH7Q9BT30 221 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 RALYQ9UKM9 306 aaKnown RBP7.76□□□□□ -1.17
CTNND1-208ENST00000428599 A8MWL6 223 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 EWSR1Q01844 656 aaKnown RBP eCLIP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 RTN4RQ9BZR6 473 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 ADAP1O75689 374 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CFDP00746 253 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 BGLAPP02818 100 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CKS2P33552 79 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CTF1Q16619 201 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 OR8G5Q8NG78 346 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 SCMH1Q96GD3 660 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 WDFY2Q96P53 400 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 TRPM7Q96QT4 1865 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 TRAV39A0A0B4J263 110 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 NKX2-6A6NCS4 301 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 PRR19A6NJB7 356 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 FOXS1O43638 330 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 KBTBD11O94819 623 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CD99P14209 185 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 ANOS1P23352 680 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CRYBB2P43320 205 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CDX1P47902 265 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 DLX6P56179 175 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF56Q15929 161 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 OR4A47Q6IF82 309 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF501Q96CX3 271 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 GPR82Q96P67 336 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 IDI2-AS1Q9NZ38 188 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF107Q9UII5 783 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 RBM11P57052 281 aaKnown RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CEACAM21Q3KPI0 293 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms