RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 ACTL6BO94805 426 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 SP1P08047 785 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 DLK1P80370 383 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 FAM185AQ8N0U4 392 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 ASB13Q8WXK3 278 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 SAT2Q96F10 170 aaPredicted RBP12.84□□□□□ -0.35
SCAP-206ENST00000428413 PACRGQ96M98 296 aaPredicted RBP12.84□□□□□ -0.35
SCAP-206ENST00000428413 TMEM222Q9H0R3 208 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 A0A1W2PPV4 95 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 OR2H2O95918 312 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 RND3P61587 244 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 DCHS1Q96JQ0 3298 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 PLXNB1O43157 2135 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 CRYGSP22914 178 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 SSTR5P35346 364 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 OR8B8Q15620 311 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 DDA1Q9BW61 102 aa12.84□□□□□ -0.35
SCAP-206ENST00000428413 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
SCAP-206ENST00000428413 DTYMKP23919 212 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 CHRNA7P36544 502 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCAP-206ENST00000428413 CEACAM21Q3KPI0 293 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
SCAP-206ENST00000428413 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 RAB39BQ96DA2 213 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 PATZ1Q9HBE1 687 aaKnown RBP12.83□□□□□ -0.36
SCAP-206ENST00000428413 TCF21O43680 179 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 RPS2P15880 293 aaKnown RBP12.83□□□□□ -0.36
SCAP-206ENST00000428413 F2RP25116 425 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
SCAP-206ENST00000428413 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 VSIRQ9H7M9 311 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 CBY3A6NI87 242 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 SYNGR2O43760 224 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 TMEM211Q6ICI0 200 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 TMEM178AQ8NBL3 297 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 GALMQ96C23 342 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 MYOZ1Q9NP98 299 aaPredicted RBP12.83□□□□□ -0.36
SCAP-206ENST00000428413 OR2W1Q9Y3N9 320 aa12.83□□□□□ -0.36
SCAP-206ENST00000428413 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 IGHV3-48P01763 117 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 FGF12P61328 243 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 NAAAQ02083 359 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 PDLIM3Q53GG5 364 aaPredicted RBP12.82□□□□□ -0.36
SCAP-206ENST00000428413 ZCCHC24Q8N2G6 241 aaKnown RBP12.82□□□□□ -0.36
SCAP-206ENST00000428413 CABLES2Q9BTV7 478 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 TM2D1Q9BX74 207 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 TMEM100Q9NV29 134 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 POMT1Q9Y6A1 747 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 TGIF2-C20orf24A0A0A6YYL0 155 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 HBG1P69891 147 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 HBG2P69892 147 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 SRPXP78539 464 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 ZFP36L1Q07352 338 aaKnown RBP12.82□□□□□ -0.36
SCAP-206ENST00000428413 IL13RA2Q14627 380 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 KHDC3LQ587J8 217 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 SCCPDHQ8NBX0 429 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 TMEM171Q8WVE6 324 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 SSMEM1Q8WWF3 244 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 MSI2Q96DH6 328 aaKnown RBP12.82□□□□□ -0.36
SCAP-206ENST00000428413 ZNF703Q9H7S9 590 aaPredicted RBP12.82□□□□□ -0.36
SCAP-206ENST00000428413 PARP11Q9NR21 331 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 TAAR3PQ9P1P4 343 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 M0R1X1 148 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 DVL1O14640 695 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 SNCAP37840 140 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 GLIPR1P48060 266 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 TRIP6Q15654 476 aaKnown RBP12.82□□□□□ -0.36
SCAP-206ENST00000428413 GFI1BQ5VTD9 330 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 VWA1Q6PCB0 445 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 LYPD6Q86Y78 171 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 Q9N2K0 584 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 RPH3ALQ9UNE2 315 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 LAMP3Q9UQV4 416 aa12.82□□□□□ -0.36
SCAP-206ENST00000428413 LOC102723996A0A087X1L8 192 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 CCL1P22362 96 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 B3GALT5-AS1P59052 145 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 KCNMB1Q16558 191 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 FBXW9Q5XUX1 488 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 OR5B12Q96R08 314 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 ZNF71Q9NQZ8 489 aaPredicted RBP12.81□□□□□ -0.36
SCAP-206ENST00000428413 EREGO14944 169 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 MMP7P09237 267 aaPredicted RBP12.81□□□□□ -0.36
SCAP-206ENST00000428413 SNX22Q96L94 193 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 RPRMQ9NS64 109 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 DMXL2Q8TDJ6 3036 aa12.81□□□□□ -0.36
SCAP-206ENST00000428413 LRRC29Q8WV35 223 aa12.8□□□□□ -0.36
SCAP-206ENST00000428413 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
SCAP-206ENST00000428413 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
SCAP-206ENST00000428413 LRP5LA4QPB2 252 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms