RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 HIST1H1DP16402 221 aaKnown RBP11.77□□□□□ -0.53
RTN4-210ENST00000427710 LSM3P62310 102 aaKnown RBP11.77□□□□□ -0.53
RTN4-210ENST00000427710 LY6G6FQ5SQ64 297 aa11.77□□□□□ -0.53
RTN4-210ENST00000427710 STEAP3Q658P3 488 aa11.77□□□□□ -0.53
RTN4-210ENST00000427710 GLDNQ6ZMI3 551 aaPredicted RBP11.77□□□□□ -0.53
RTN4-210ENST00000427710 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
RTN4-210ENST00000427710 ZNF329Q86UD4 541 aa11.77□□□□□ -0.53
RTN4-210ENST00000427710 TPRA1Q86W33 373 aa11.77□□□□□ -0.53
RTN4-210ENST00000427710 C1QL4Q86Z23 238 aa11.77□□□□□ -0.53
RTN4-210ENST00000427710 C11orf54Q9H0W9 315 aaPredicted RBP11.77□□□□□ -0.53
RTN4-210ENST00000427710 PRKDCP78527 4128 aaKnown RBP11.76□□□□□ -0.53
RTN4-210ENST00000427710 A0A087WXM4 84 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 METTL21EPA6NDL7 271 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 TXNL1O43396 289 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 LINC00205P59089 165 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 MRPS15P82914 257 aaKnown RBP11.76□□□□□ -0.53
RTN4-210ENST00000427710 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 IGSF11Q5DX21 431 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 IDNKQ5T6J7 187 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 YIPF6Q96EC8 236 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 S1PR3Q99500 378 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 ZNF251Q9BRH9 671 aa11.76□□□□□ -0.53
RTN4-210ENST00000427710 IGKV1D-8A0A087WSZ0 117 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 TCRBV4S1A1TA0A5B7 111 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 PSMB11A5LHX3 300 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 BET1O15155 118 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 FABP7O15540 132 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 ZBTB25P24278 435 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 CD83Q01151 205 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 CDNFQ49AH0 187 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 KHDC1LQ5JSQ8 128 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 SLC35E3Q7Z769 313 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 PTX4Q96A99 478 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 R3HDM4Q96D70 268 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 RASL11BQ9BPW5 248 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 HSPB9Q9BQS6 159 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 RDH8Q9NYR8 311 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 MGAT4AQ9UM21 535 aa11.75□□□□□ -0.53
RTN4-210ENST00000427710 RAB29O14966 203 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 KCNAB3O43448 404 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 IGHG2P01859 326 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 TALDO1P37837 337 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 GPR12P47775 334 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 ACTBP60709 375 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 FAM131AQ6UXB0 335 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
RTN4-210ENST00000427710 OR4A4PQ8NGN8 299 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 NUDCD2Q8WVJ2 157 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 ABCG5Q9H222 651 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 PIPOXQ9P0Z9 390 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 TNCP24821 2201 aa11.74□□□□□ -0.53
RTN4-210ENST00000427710 TMEM235A6NFC5 223 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 AIREO43918 545 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 DEFA6Q01524 100 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 MMDQ15546 238 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 C18orf65Q6ZTR6 163 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 OR4X2Q8NGF9 303 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 SLC25A38Q96DW6 304 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 VCX3AQ9NNX9 186 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 LIN7CQ9NUP9 197 aaKnown RBP11.73□□□□□ -0.53
RTN4-210ENST00000427710 RHBDL2Q9NX52 303 aa11.73□□□□□ -0.53
RTN4-210ENST00000427710 J3QRK9 145 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 ITGB1BP1O14713 200 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 PROP1O75360 226 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 ZNF260Q3ZCT1 412 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 LCNL1Q6ZST4 164 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 STPG2Q8N412 459 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 EDARADDQ8WWZ3 215 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 ST6GALNAC5Q9BVH7 336 aa11.72□□□□□ -0.53
RTN4-210ENST00000427710 TSSC4Q9Y5U2 329 aaPredicted RBP11.72□□□□□ -0.53
RTN4-210ENST00000427710 TRIM64CA6NLI5 447 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 G3V4G9 280 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 H0YJW9 148 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 WIPF1O43516 503 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 SSX5O60225 188 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 OPN1MWP04001 364 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 OR8U9P0C7N5 309 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 SMIM18P0DKX4 95 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
RTN4-210ENST00000427710 KIR2DS1Q14954 304 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 HACD4Q5VWC8 232 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 FOXRED2Q8IWF2 684 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 OR8U1Q8NH10 309 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 OR10J5Q8NHC4 309 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 CHPT1Q8WUD6 406 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 PHF21AQ96BD5 680 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 C5orf30Q96GV9 206 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1302.5 ms