RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PTPRZ1P23471 2315 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 F8W036 122 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 H3BP45 60 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 RAMP3O60896 148 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ATG12O94817 140 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ADH4P08319 380 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 IAPPP10997 89 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 GATA4P43694 442 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 HTD2P86397 168 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNF616Q08AN1 781 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 MSMO1Q15800 293 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 STX12Q86Y82 276 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 FGFRL1Q8N441 504 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNRF1Q8ND25 227 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 TSNAXQ99598 290 aaKnown RBP11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 UQCC1Q9NVA1 299 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 CACFD1Q9UGQ2 172 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 APC2O95996 2303 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 TXNL1O43396 289 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 SYNGR2O43760 224 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 C1QL1O75973 258 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 TSPAN15O95858 294 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 FAM87AP0C7U9 286 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 TNFSF4P23510 183 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 FHITP49789 147 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 RAB5CP51148 216 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 EDDM3BP56851 147 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 TMEM267Q0VDI3 215 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 Q3ZCU0 254 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 MIDNQ504T8 468 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 LYPD6BQ8NI32 183 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 GCM1Q9NP62 436 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 C19orf12Q9NSK7 152 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 IL19Q9UHD0 177 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 MSRB2Q9Y3D2 182 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 MMP24Q9Y5R2 645 aa11.67□□□□□ -0.54
APOBEC3D-202ENST00000427494 RNASEK-C17orf49H0YIS7 233 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 K7N7A8 449 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 CLDN1O95832 211 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 GZMHP20718 246 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 PTAFRP25105 342 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 SPAG16Q8N0X2 631 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 OR2G3Q8NGZ4 309 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 ATP5SQ99766 215 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 WSB1Q9Y6I7 421 aa11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 RAI1Q7Z5J4 1906 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3D-202ENST00000427494 C17orf98A8MV24 154 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 S1PR2O95136 353 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 CYB5R3P00387 301 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 G6PCP35575 357 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 SULT1A1P50225 295 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 GUCA2BQ16661 112 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 SVBPQ8N300 66 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 PLPPR2Q96GM1 343 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 PSENENQ9NZ42 101 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 JKAMPQ9P055 326 aa11.65□□□□□ -0.54
APOBEC3D-202ENST00000427494 DPRXA6NFQ7 191 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 TSPAN4O14817 238 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 KRASP01116 189 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 THBDP07204 575 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 SELLP14151 372 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 RBPJQ06330 500 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 BSPH1Q075Z2 132 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 C10orf91Q5T1B1 145 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF66Q6ZN08 573 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM213BQ8TBF2 198 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM222BQ8WU58 562 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 EDARADDQ8WWZ3 215 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 C14orf79Q96F83 325 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 KCNJ16Q9NPI9 418 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 JPT1Q9UK76 154 aa11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 CARHSP1Q9Y2V2 147 aaKnown RBP11.65□□□□□ -0.55
APOBEC3D-202ENST00000427494 ACACAQ13085 2346 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 SPTBN2O15020 2390 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 MED19A0JLT2 244 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 TRIM77I1YAP6 450 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 TOR1AO14656 332 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 NUPL2O15504 423 aaKnown RBP11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 GFRA3O60609 400 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 GPR12P47775 334 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 TMPRSS3P57727 454 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 BRWD1-AS2P59051 145 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 NHLH1Q02575 133 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 CR1LQ2VPA4 569 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF561Q8N587 486 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 TCTEX1D1Q8N7M0 179 aa11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
APOBEC3D-202ENST00000427494 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms