RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SLC51BQ86UW2 128 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 OR52M1Q8NGK5 317 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 OR51H1Q8NH63 302 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 DCUN1D4Q92564 292 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 ABHD14BQ96IU4 210 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 TAS2R3Q9NYW6 316 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 SLC25A10Q9UBX3 287 aaPredicted RBP11.94□□□□□ -0.5
CDK3-201ENST00000425876 LPAR3Q9UBY5 353 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
CDK3-201ENST00000425876 IGHV3-43A0A0B4J1X8 118 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 DEDDO75618 318 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 IGHV3-43DP0DP04 118 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 IGFBP2P18065 325 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
CDK3-201ENST00000425876 MRPS11P82912 194 aaKnown RBP11.93□□□□□ -0.5
CDK3-201ENST00000425876 CATR1Q13166 79 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 TCF23Q7RTU1 214 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 DTX2Q86UW9 622 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 OR10A7Q8NGE5 316 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 OR4D5Q8NGN0 318 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 OR1S1Q8NH92 325 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
CDK3-201ENST00000425876 AQP10Q96PS8 301 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 GFOD1Q9NXC2 390 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 OR5AC2Q9NZP5 309 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 GAB2Q9UQC2 676 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 ASH1LQ9NR48 2969 aaKnown RBP11.93□□□□□ -0.5
CDK3-201ENST00000425876 DSCAML1Q8TD84 2053 aa11.93□□□□□ -0.5
CDK3-201ENST00000425876 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 KANTRA0A1W2PQU2 76 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 ADAM20O43506 726 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 BCL2L11O43521 198 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 MBPP02686 304 aaPredicted RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 S100A10P60903 97 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 FAM53AQ6NSI3 398 aaPredicted RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 HSD17B10Q99714 261 aaKnown RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 A0A1B0GU03 582 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 K7EPK0 472 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 ST8SIA3O43173 380 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 NDUFB3O43676 98 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 ATP6V1G1O75348 118 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 DANCRP0C864 163 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 NDUFB7P17568 137 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 RAB7AP51149 207 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 AP2S1P53680 142 aaPredicted RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 ZNF585BQ52M93 769 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 THOC7Q6I9Y2 204 aaKnown RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 FAM71E2Q8N5Q1 922 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 NEU4Q8WWR8 484 aaPredicted RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
CDK3-201ENST00000425876 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 SDHAF2Q9NX18 166 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 IDI2-AS1Q9NZ38 188 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 PSG11Q9UQ72 335 aa11.92□□□□□ -0.5
CDK3-201ENST00000425876 MEX3AA1L020 520 aaKnown RBP11.91□□□□□ -0.5
CDK3-201ENST00000425876 E5RGE8 158 aa11.91□□□□□ -0.5
CDK3-201ENST00000425876 GOSR1O95249 250 aa11.91□□□□□ -0.5
CDK3-201ENST00000425876 CFDP00746 253 aaPredicted RBP11.91□□□□□ -0.5
CDK3-201ENST00000425876 RPL31P62899 125 aaKnown RBP11.91□□□□□ -0.5
CDK3-201ENST00000425876 UBA52P62987 128 aaKnown RBP11.91□□□□□ -0.5
CDK3-201ENST00000425876 EXOSC2Q13868 293 aaKnown RBP11.91□□□□□ -0.5
CDK3-201ENST00000425876 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.91□□□□□ -0.5
CDK3-201ENST00000425876 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
CDK3-201ENST00000425876 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
CDK3-201ENST00000425876 NSG2Q9Y328 171 aa11.91□□□□□ -0.5
CDK3-201ENST00000425876 POMT1Q9Y6A1 747 aa11.91□□□□□ -0.5
CDK3-201ENST00000425876 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 CLDN1O95832 211 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 IGKV1-39P01597 117 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 IGKV1D-39P04432 117 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 COL8A2P25067 703 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 NKX2-1P43699 371 aaPredicted RBP11.9□□□□□ -0.5
CDK3-201ENST00000425876 GPR12P47775 334 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 LTC4SQ16873 150 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 LYPD2Q6UXB3 125 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 ARPC5LQ9BPX5 153 aa11.9□□□□□ -0.5
CDK3-201ENST00000425876 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.5
CDK3-201ENST00000425876 LSM5Q9Y4Y9 91 aaKnown RBP11.9□□□□□ -0.5
CDK3-201ENST00000425876 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 PITX3O75364 302 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 FCN3O75636 299 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 ATG12O94817 140 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 IGHV2-70P01814 119 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 SOD3P08294 240 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
CDK3-201ENST00000425876 OMGP23515 440 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 HTR2BP41595 481 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 RPL30P62888 115 aaKnown RBP11.89□□□□□ -0.51
CDK3-201ENST00000425876 ID3Q02535 119 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 SRSF1Q07955 248 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDK3-201ENST00000425876 Q3ZCU0 254 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 FGFRL1Q8N441 504 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms