RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 UNQ6494/PRO21346Q6UXR6 183 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 DRAM1Q8N682 238 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OR4F5Q8NH21 305 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM37Q8WXS4 190 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 LSM10Q969L4 123 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OR4F4Q96R69 305 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 CLN8Q9UBY8 286 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 A0A1W2PPQ1 181 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 H7BYZ3 331 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 NXPH2O95156 264 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 MT-CO3P00414 261 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 SLC25A6P12236 298 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 DEFA4P12838 97 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 BMP5P22003 454 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 G6PCP35575 357 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 CEBPDP49716 269 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 RND2P52198 227 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 CLDN18P56856 261 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 BSXQ3C1V8 233 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 SSX9Q7RTT3 188 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 PINX1Q96BK5 328 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 C14orf144Q96I85 54 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 PSMG3Q9BT73 122 aaPredicted RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 LINC00470Q9BZP3 86 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 LIN7CQ9NUP9 197 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 B4GALT7Q9UBV7 327 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 MPC1Q9Y5U8 109 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 USF3Q68DE3 2245 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 IGKV3D-15A0A087WSY6 115 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 OR5B21A6NL26 309 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF705GA8MUZ8 300 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 IL2RGP31785 369 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 IDH3GP51553 393 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 CD81P60033 236 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 HOXA4Q00056 320 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 COL10A1Q03692 680 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 SSPNQ14714 243 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 RNPS1Q15287 305 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 NRN1LQ496H8 165 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF66Q6ZN08 573 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 GTF3AQ92664 365 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 OR5B12Q96R08 314 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 FAM173AQ9BQD7 235 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 NAT8Q9UHE5 227 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 PITPNC1Q9UKF7 332 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 LOXL2Q9Y4K0 774 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 DOCK10Q96BY6 2186 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 TRBV24-1A0A075B6N3 115 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 A0A087X0M5 115 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 A0A1B0GV90 55 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 A0A1B0GX30 115 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 RAMP3O60896 148 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 PDGFBP01127 241 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 PSMB3P49720 205 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 MEF2BQ02080 365 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 Q6P435 159 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 CXorf67Q86X51 503 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 P2RX4Q99571 388 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 PCGF1Q9BSM1 259 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 ELOVL1Q9BW60 279 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 GPR87Q9BY21 358 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 OR51I2Q9H344 312 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM242Q9NWH2 141 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 AURKAIP1Q9NWT8 199 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 SPTBN2O15020 2390 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 NCKAP5O14513 1909 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 PIGBOS1A0A0B4J2F0 54 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 PPP5D1E7EU14 171 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 J3QT63 122 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 NEURL1O76050 574 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 RNF224P0DH78 156 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 COX5BP10606 129 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 GALR1P47211 349 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 ACSM6Q6P461 480 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 MDP1Q86V88 176 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 OR10G9Q8NGN4 311 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 OR10G7Q8NGN6 311 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 CTDSP1Q9GZU7 261 aa6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF703Q9H7S9 590 aaPredicted RBP6.36□□□□□ -1.39
SMARCC1-202ENST00000425518 MAP1BP46821 2468 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TRBV6-6A0A0A6YYG2 114 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 XKRY2A2RUG3 117 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 FGF7P21781 194 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 DDTP30046 118 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 OR3A1P47881 315 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 LINC00205P59089 165 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 OR1C1Q15619 314 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 ALKBH6Q3KRA9 238 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 FFAR4Q5NUL3 377 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 BTNL3Q6UXE8 466 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 LINC00596Q86U02 117 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM251Q8N6I4 163 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM105Q8N8V8 129 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 SCCPDHQ8NBX0 429 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 OR1L1Q8NH94 360 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 HIPK2Q9H2X6 1198 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms