RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 ZNF645Q8N7E2 425 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 LEAP2Q969E1 77 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 MOB3AQ96BX8 217 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 DPM3Q9P2X0 92 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 ABCA2Q9BZC7 2435 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 IGHV1-69DA0A0B4J2H0 117 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 OOSP1A8MZH6 123 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 GPR31O00270 319 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 NPFFO15130 113 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 MMP23AO75900 390 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 IGHV1-69P01742 117 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 GAPDHP04406 335 aaKnown RBP8.25□□□□□ -1.09
CD44-207ENST00000425428 RLN1P04808 185 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 MMP9P14780 707 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 UCP3P55916 312 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 TAS2R31P59538 309 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 MSMO1Q15800 293 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 HLA-DRB5Q30154 266 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 ZNF626Q68DY1 528 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 FAAP20Q6NZ36 180 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 PLET1Q6UQ28 207 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 Q6ZPA2 131 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 ADTRPQ96IZ2 230 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 CYYR1Q96J86 154 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 TBX15Q96SF7 602 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 RNF150Q9ULK6 438 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 PRELID3BQ9Y3B1 194 aa8.25□□□□□ -1.09
CD44-207ENST00000425428 FLNAP21333 2647 aaKnown RBP8.24□□□□□ -1.09
CD44-207ENST00000425428 CENPVL3A0A0U1RRI6 287 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 A0A1W2PPE3 182 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 A0A1W2PRD5 423 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 A0A1W2PRF3 423 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 A0A1W2PRM7 423 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 BUB1B-PAK6H3BSN5 160 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 HSD17B6O14756 317 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 TUSC2O75896 110 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 ANXA3P12429 323 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 BRS3P32247 399 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 TAGLNQ01995 201 aaKnown RBP8.24□□□□□ -1.09
CD44-207ENST00000425428 KLRD1Q13241 179 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 CT45A1Q5HYN5 189 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 TGIF2LXQ8IUE1 241 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 C11orf42Q8N5U0 333 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 ZDHHC22Q8N966 263 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 OR4D10Q8NGI6 311 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 CT45A3Q8NHU0 189 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 MALSU1Q96EH3 234 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 HSD17B10Q99714 261 aaKnown RBP8.24□□□□□ -1.09
CD44-207ENST00000425428 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 BEX2Q9BXY8 128 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 TMEM160Q9NX00 188 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 KCNIP3Q9Y2W7 256 aa8.24□□□□□ -1.09
CD44-207ENST00000425428 TEX13DA0A0J9YY54 714 aaPredicted RBP8.23□□□□□ -1.09
CD44-207ENST00000425428 BTBD17A6NE02 478 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 PTTG1O95997 202 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 APOA2P02652 100 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 FBP1P09467 338 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 RBMS3Q6XE24 437 aaKnown RBP8.23□□□□□ -1.09
CD44-207ENST00000425428 ZNF66Q6ZN08 573 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 CENPSQ8N2Z9 138 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 MARCH1Q8TCQ1 289 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 ZDHHC16Q969W1 377 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 ABHD14BQ96IU4 210 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 CDC42EP3Q9UKI2 254 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 GAB2Q9UQC2 676 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 NUBP2Q9Y5Y2 271 aa8.23□□□□□ -1.09
CD44-207ENST00000425428 OR5H14A6NHG9 310 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 M0R1X1 148 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 B3GALNT1O75752 331 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 CTSDP07339 412 aaPredicted RBP8.22□□□□□ -1.09
CD44-207ENST00000425428 KIR2DS2P43631 304 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 THBS3P49746 956 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 RTL8BQ17RB0 113 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 TRIM16LQ309B1 348 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 FAM120AOSQ5T036 256 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 AADACL3Q5VUY0 350 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 C5orf24Q7Z6I8 188 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 TMED4Q7Z7H5 227 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 MOB3BQ86TA1 216 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 SGPP2Q8IWX5 399 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 OR8H3Q8N146 312 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 MINDY2Q8NBR6 621 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 ZNF439Q8NDP4 499 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 CD300LFQ8TDQ1 290 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 ZFAND2BQ8WV99 257 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 AIFM2Q9BRQ8 373 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 LIN7CQ9NUP9 197 aaKnown RBP8.22□□□□□ -1.09
CD44-207ENST00000425428 IGHV3OR16-10A0A075B7F0 116 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 SAA2-SAA4A0A096LPE2 208 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 PLA2G10O15496 165 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 ATG12O94817 140 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 NDUFB6O95139 128 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 LY6G6DO95868 133 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 DHFRP00374 187 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 IGLV1-47P01700 117 aa8.22□□□□□ -1.09
CD44-207ENST00000425428 TCRBP04435 133 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms