RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 PARP12Q9H0J9 701 aaKnown RBP11.5□□□□□ -0.57
ATG4B-209ENST00000425239 S100A14Q9HCY8 104 aa11.5□□□□□ -0.57
ATG4B-209ENST00000425239 CHCHD3Q9NX63 227 aaKnown RBP11.5□□□□□ -0.57
ATG4B-209ENST00000425239 CKLFQ9UBR5 152 aa11.5□□□□□ -0.57
ATG4B-209ENST00000425239 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
ATG4B-209ENST00000425239 NAPSAO96009 420 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 IGLV1-51P01701 117 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 HSPB1P04792 205 aaKnown RBP11.49□□□□□ -0.57
ATG4B-209ENST00000425239 CD1AP06126 327 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 CAPGP40121 348 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 ECSCRQ19T08 205 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 FAM71F2Q6NXP2 309 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 FAM131AQ6UXB0 335 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 PQLC1Q8N2U9 271 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 TCTEX1D1Q8N7M0 179 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 OR5AN1Q8NGI8 311 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 GALMQ96C23 342 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 UQCC2Q9BRT2 126 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 FAAP24Q9BTP7 215 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 CST11Q9H112 138 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 KCNIP1Q9NZI2 227 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 LRRC42Q9Y546 428 aa11.49□□□□□ -0.57
ATG4B-209ENST00000425239 H0YJW9 148 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 ST8SIA5O15466 376 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 OR8U9P0C7N5 309 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 IGHV4-30-4P0DP06 118 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-209ENST00000425239 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-209ENST00000425239 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 OR2AK2Q8NG84 335 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 OR6Q1Q8NGQ2 317 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 FAM46BQ96A09 425 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 FAM103A1Q9BTL3 118 aaKnown RBP11.48□□□□□ -0.57
ATG4B-209ENST00000425239 ZMAT4Q9H898 229 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 SMPD3Q9NY59 655 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-209ENST00000425239 GHRLQ9UBU3 117 aa11.48□□□□□ -0.57
ATG4B-209ENST00000425239 IRGMA1A4Y4 181 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 ITGB1BP1O14713 200 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 RGS11O94810 467 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 MYL12AP19105 171 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 HTR2CP28335 458 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 LINC00205P59089 165 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 QRFPP83859 136 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 ST3GAL4Q11206 333 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 INSL4Q14641 139 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 OR10K2Q6IF99 312 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 ZNF562Q6V9R5 426 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 GLDNQ6ZMI3 551 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-209ENST00000425239 C6orf201Q7Z4U5 140 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 SVOPQ8N4V2 548 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 LFNGQ8NES3 379 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 ABHD14BQ96IU4 210 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 GHITMQ9H3K2 345 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 CNOT2Q9NZN8 540 aaKnown RBP11.47□□□□□ -0.57
ATG4B-209ENST00000425239 PIPOXQ9P0Z9 390 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 KIAA1456Q9P272 454 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 SLC23A1Q9UHI7 598 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 ERGIC3Q9Y282 383 aa11.47□□□□□ -0.57
ATG4B-209ENST00000425239 OR5H14A6NHG9 310 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 RAB29O14966 203 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 LDLRAD4O15165 306 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 CELP19835 753 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 VEGFCP49767 419 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 RPS27AP62979 156 aaKnown RBP11.46□□□□□ -0.57
ATG4B-209ENST00000425239 UNC119Q13432 240 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 PSG5Q15238 335 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 ACTBL2Q562R1 376 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 PYHIN1Q6K0P9 492 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 LRRTM1Q86UE6 522 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 PPP1R27Q86WC6 154 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 NKAIN3Q8N8D7 197 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 MS4A10Q96PG2 267 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 RNF5Q99942 180 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 THAP7Q9BT49 309 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-209ENST00000425239 TM2D1Q9BX74 207 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 A3GALT2U3KPV4 340 aa11.46□□□□□ -0.57
ATG4B-209ENST00000425239 A0A0A6YYD4 124 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 TRBV6-6A0A0A6YYG2 114 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 PNMA8CA0A1B0GUJ8 204 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 ARPC1BO15143 372 aaKnown RBP11.45□□□□□ -0.58
ATG4B-209ENST00000425239 MC5RP33032 325 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 TMEM267Q0VDI3 215 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-209ENST00000425239 SRSF7Q16629 238 aaKnown RBP eCLIP11.45□□□□□ -0.58
ATG4B-209ENST00000425239 ZFAND6Q6FIF0 208 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 ZNF555Q8NEP9 628 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 FLYWCH2Q96CP2 140 aaKnown RBP11.45□□□□□ -0.58
ATG4B-209ENST00000425239 NICN1Q9BSH3 213 aa11.45□□□□□ -0.58
ATG4B-209ENST00000425239 C11orf54Q9H0W9 315 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-209ENST00000425239 EFCAB10A6NFE3 127 aa11.44□□□□□ -0.58
ATG4B-209ENST00000425239 FOXI3A8MTJ6 420 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-209ENST00000425239 HSPA12AO43301 675 aa11.44□□□□□ -0.58
ATG4B-209ENST00000425239 RBBP9O75884 186 aa11.44□□□□□ -0.58
ATG4B-209ENST00000425239 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
ATG4B-209ENST00000425239 PITPNAQ00169 270 aa11.44□□□□□ -0.58
ATG4B-209ENST00000425239 KLF5Q13887 457 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-209ENST00000425239 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms