RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 Q6ZSV7 163 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 OR4C13Q8NGP0 309 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 ST6GALNAC6Q969X2 333 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 ABHD14BQ96IU4 210 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 AKR1E2Q96JD6 320 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 S1PR3Q99500 378 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
BRAT1-202ENST00000421712 IFT46Q9NQC8 304 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 ZNF221Q9UK13 617 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 CEPT1Q9Y6K0 416 aa12.64□□□□□ -0.39
BRAT1-202ENST00000421712 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 TRBV6-7A0A0A0MS04 114 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 MEIS3P1A6NDR6 274 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 LANCL1O43813 399 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 IGKV1D-33P01593 117 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 IGKV1-33P01594 117 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 CTXN2P0C2S0 81 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 SAA2P0DJI9 122 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-202ENST00000421712 TMEM11P17152 192 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 CBX5P45973 191 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 ZNF137PP52743 207 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 ARPC4P59998 168 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-202ENST00000421712 THNSL2Q86YJ6 484 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 GVQW1Q8N7I0 195 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 SLC25A33Q9BSK2 321 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
BRAT1-202ENST00000421712 A0A1B0GUS0 222 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 CLPSL1A2RUU4 121 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 J3QRK9 145 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 HAX1O00165 279 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 ITGB1BP1O14713 200 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 PRSS3P35030 304 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 GPR12P47775 334 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 COMPP49747 757 aaPredicted RBP12.62□□□□□ -0.39
BRAT1-202ENST00000421712 CNIH2Q6PI25 160 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 C16orf82Q7Z2V1 217 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 SNX29P2Q8IUI4 249 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 ODF3L1Q8IXM7 274 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 DYNC2LI1Q8TCX1 351 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 CFHR4Q92496 578 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 RBM14Q96PK6 669 aaKnown RBP12.62□□□□□ -0.39
BRAT1-202ENST00000421712 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 CCDC59Q9P031 241 aaKnown RBP12.62□□□□□ -0.39
BRAT1-202ENST00000421712 ANXA10Q9UJ72 324 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 RNF114Q9Y508 228 aa12.62□□□□□ -0.39
BRAT1-202ENST00000421712 FAM90A9PA6NNJ1 464 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 TSPAN9O75954 239 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 OR2F2O95006 317 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 DIRAS3O95661 229 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 CD1BP29016 333 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 RPL39P5Q59GN2 51 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 ZNF833PQ6ZTB9 187 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 HOGA1Q86XE5 327 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 OR2T10Q8NGZ9 312 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 OR2T6Q8NHC8 308 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 LINC01006Q8NI28 216 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 MRPL20Q9BYC9 149 aaKnown RBP12.61□□□□□ -0.39
BRAT1-202ENST00000421712 PRSS22Q9GZN4 317 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 RANBP3Q9H6Z4 567 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-202ENST00000421712 EXTL2Q9UBQ6 330 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 RSL24D1Q9UHA3 163 aaKnown RBP12.61□□□□□ -0.39
BRAT1-202ENST00000421712 ADAM30Q9UKF2 790 aa12.61□□□□□ -0.39
BRAT1-202ENST00000421712 NCBP2LA6PVI3 153 aaKnown RBP12.6□□□□□ -0.39
BRAT1-202ENST00000421712 ZNF736B4DX44 427 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-202ENST00000421712 NFYAP23511 347 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-202ENST00000421712 BLCAPP62952 87 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 FBLN7Q53RD9 439 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 NABP2Q9BQ15 211 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 C6orf62Q9GZU0 229 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-202ENST00000421712 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 C16orf95Q9H693 158 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 SIGLEC9Q9Y336 463 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 MOB4Q9Y3A3 225 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 MMP24Q9Y5R2 645 aa12.6□□□□□ -0.39
BRAT1-202ENST00000421712 CTDSP2O14595 271 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 PEX14O75381 377 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 MOSP00540 346 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 LSAMPQ13449 338 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-202ENST00000421712 ABCA11PQ4W5N1 156 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 C9orf152Q5JTZ5 239 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 FAM71F2Q6NXP2 309 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-202ENST00000421712 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-202ENST00000421712 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 TOLLIPQ9H0E2 274 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 NECAP2Q9NVZ3 263 aa12.59□□□□□ -0.39
BRAT1-202ENST00000421712 H7C2Y5 167 aa12.58□□□□□ -0.4
BRAT1-202ENST00000421712 M0QZK8 103 aa12.58□□□□□ -0.4
BRAT1-202ENST00000421712 M0R1X1 148 aa12.58□□□□□ -0.4
BRAT1-202ENST00000421712 RNASE12Q5GAN4 147 aaKnown RBP12.58□□□□□ -0.4
BRAT1-202ENST00000421712 GLDNQ6ZMI3 551 aaPredicted RBP12.58□□□□□ -0.4
BRAT1-202ENST00000421712 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
BRAT1-202ENST00000421712 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms