RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 RHOVQ96L33 236 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 PGLYRP3Q96LB9 341 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 Q96M66 194 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 RDH12Q96NR8 316 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 OR4C12Q96R67 309 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 MYCBPQ99417 103 aaPredicted RBP6.21□□□□□ -1.42
VIM-202ENST00000421459 SULT4A1Q9BR01 284 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 FAAP24Q9BTP7 215 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 RSRP1Q9BUV0 290 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 VCX3BQ9H321 246 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 SPACA1Q9HBV2 294 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 RETNQ9HD89 108 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 C8orf4Q9NR00 106 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 FOXA2Q9Y261 457 aaPredicted RBP6.21□□□□□ -1.42
VIM-202ENST00000421459 ANKRD34BA5PLL1 514 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 RRHO14718 337 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 ARPC1BO15143 372 aaKnown RBP6.2□□□□□ -1.42
VIM-202ENST00000421459 YPEL1O60688 119 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 PDCD6O75340 191 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 HSPB1P04792 205 aaKnown RBP6.2□□□□□ -1.42
VIM-202ENST00000421459 OR8U9P0C7N5 309 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 CRIP2P52943 208 aaPredicted RBP6.2□□□□□ -1.42
VIM-202ENST00000421459 TPPP2P59282 170 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 HTD2P86397 168 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 PITPNAQ00169 270 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 GPR176Q14439 515 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 INSL4Q14641 139 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 HAGHQ16775 308 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 Q499Y3 187 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 C6orf141Q5SZD1 244 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 ZNF660Q6AZW8 331 aaPredicted RBP6.2□□□□□ -1.42
VIM-202ENST00000421459 UNQ5815/PRO19632Q6UWF5 114 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 TMPRSS11AQ6ZMR5 421 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 C6orf201Q7Z4U5 140 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 DRAXINQ8NBI3 349 aaPredicted RBP6.2□□□□□ -1.42
VIM-202ENST00000421459 ZNF485Q8NCK3 441 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 YPEL2Q96QA6 119 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 C9orf16Q9BUW7 83 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 GHITMQ9H3K2 345 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 KCNIP1Q9NZI2 227 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 CNOT2Q9NZN8 540 aaKnown RBP6.2□□□□□ -1.42
VIM-202ENST00000421459 JPT1Q9UK76 154 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 RNF150Q9ULK6 438 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 LRRC42Q9Y546 428 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 HERC2O95714 4834 aa6.2□□□□□ -1.42
VIM-202ENST00000421459 DNAH10Q8IVF4 4471 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 IZUMO1RA6ND01 250 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 H0YJW9 148 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 H7C2Y5 167 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 PROP1O75360 226 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 CA2P00918 260 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 TRGV3P03979 118 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
VIM-202ENST00000421459 ARSBP15848 533 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 FSTP19883 344 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 DCKP27707 260 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 HTR2CP28335 458 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 CAPGP40121 348 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 PSG5Q15238 335 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 HMGN3Q15651 99 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 TMEM30BQ3MIR4 351 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 ACTBL2Q562R1 376 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 TRAT1Q6PIZ9 186 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 IZUMO2Q6UXV1 221 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 IL34Q6ZMJ4 242 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 ANKRD13BQ86YJ7 626 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 OR5T1Q8NG75 326 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 OR2AK2Q8NG84 335 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 SETD6Q8TBK2 473 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 GGHQ92820 318 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 GALMQ96C23 342 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 ISOC1Q96CN7 298 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 DERL3Q96Q80 235 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 NICN1Q9BSH3 213 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 HDHD3Q9BSH5 251 aaPredicted RBP6.19□□□□□ -1.42
VIM-202ENST00000421459 CST11Q9H112 138 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 RAB9BQ9NP90 201 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 ZNF355PQ9NSJ1 428 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 OR1A1Q9P1Q5 309 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 METTL1Q9UBP6 276 aaKnown RBP6.19□□□□□ -1.42
VIM-202ENST00000421459 CKLFQ9UBR5 152 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 ERGIC3Q9Y282 383 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
VIM-202ENST00000421459 A0A0A6YYD4 124 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 HSPA12AO43301 675 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 CA11O75493 328 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 RBMXL2O75526 392 aaKnown RBP6.18□□□□□ -1.42
VIM-202ENST00000421459 TRBV12-3P01733 135 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 SSBP2P81877 361 aaPredicted RBP6.18□□□□□ -1.42
VIM-202ENST00000421459 TMEM267Q0VDI3 215 aaPredicted RBP6.18□□□□□ -1.42
VIM-202ENST00000421459 PJVKQ0ZLH3 352 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 AKIRIN2Q53H80 203 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 YIF1BQ5BJH7 314 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 CD200R1LQ6Q8B3 271 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 GRPEL2Q8TAA5 225 aa6.18□□□□□ -1.42
VIM-202ENST00000421459 FLYWCH2Q96CP2 140 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms