RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CD300LFQ8TDQ1 290 aa9.21□□□□□ -0.94
DDX56-203ENST00000421223 TMEM68Q96MH6 324 aa9.21□□□□□ -0.94
DDX56-203ENST00000421223 SEC11CQ9BY50 192 aa9.21□□□□□ -0.94
DDX56-203ENST00000421223 SMG1Q96Q15 3661 aaKnown RBP9.2□□□□□ -0.94
DDX56-203ENST00000421223 IGKV1-39P01597 117 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 IGKV1D-39P04432 117 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 G6PCP35575 357 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 FLI1Q01543 452 aaPredicted RBP9.2□□□□□ -0.94
DDX56-203ENST00000421223 GUSBP1Q15486 140 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 BTNL8Q6UX41 500 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 THNSL2Q86YJ6 484 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 SPAG16Q8N0X2 631 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 ZNRF1Q8ND25 227 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 OR13A1Q8NGR1 328 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 TCTEX1D2Q8WW35 142 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 CACFD1Q9UGQ2 172 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 NDRG3Q9UGV2 375 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 PSG11Q9UQ72 335 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 M0R036 132 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 P2RY6Q15077 328 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 OR8G2PQ6IF36 304 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 PARP11Q9NR21 331 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 LYRM2Q9NU23 88 aaPredicted RBP9.2□□□□□ -0.94
DDX56-203ENST00000421223 CBY1Q9Y3M2 126 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 FAM215AQ9Y5M1 114 aa9.2□□□□□ -0.94
DDX56-203ENST00000421223 CHD3Q12873 2000 aaKnown RBP9.2□□□□□ -0.94
DDX56-203ENST00000421223 TMEM210A6NLX4 147 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 J3QW42 95 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 EGR1P18146 543 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 EIF2S3P41091 472 aaKnown RBP9.19□□□□□ -0.94
DDX56-203ENST00000421223 RPL23AP62750 156 aaKnown RBP9.19□□□□□ -0.94
DDX56-203ENST00000421223 ID3Q02535 119 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 ZNF266Q14584 549 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 SRSF7Q16629 238 aaKnown RBP eCLIP9.19□□□□□ -0.94
DDX56-203ENST00000421223 GUK1Q16774 197 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 HAGHQ16775 308 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 MOB1BQ7L9L4 216 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 SSX9Q7RTT3 188 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 COQ2Q96H96 371 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 OR2V2Q96R30 315 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 GNG12Q9UBI6 72 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 A0A1B0GWJ7 208 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 CLN5O75503 358 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 IGKV1-5P01602 117 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 IGLV2-14P01704 120 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 SNRNP70P08621 437 aaKnown RBP9.19□□□□□ -0.94
DDX56-203ENST00000421223 SEC11BP0C7V7 166 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 DANCRP0C864 163 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 SPP1P10451 314 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 DAOP14920 347 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 PRDX2P32119 198 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 ZNF880Q6PDB4 577 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 C22orf34Q6ZV56 151 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
DDX56-203ENST00000421223 SFT2D1Q8WV19 159 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 LEAP2Q969E1 77 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 ABHD17AQ96GS6 310 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 CABLES2Q9BTV7 478 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 PRELID3BQ9Y3B1 194 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 SLC25A15Q9Y619 301 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 COL6A6A6NMZ7 2263 aa9.19□□□□□ -0.94
DDX56-203ENST00000421223 ATRXP46100 2492 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 A0A1W2PPE3 182 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 SNAPINO95295 136 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 CLDN1O95832 211 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 RPL30P62888 115 aaKnown RBP9.18□□□□□ -0.94
DDX56-203ENST00000421223 CCL20P78556 96 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 TLE1Q04724 770 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 ZCCHC24Q8N2G6 241 aaKnown RBP9.18□□□□□ -0.94
DDX56-203ENST00000421223 FGFRL1Q8N441 504 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 CD177Q8N6Q3 437 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 RARRES2Q99969 163 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 GINS3Q9BRX5 216 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 RPS10P5Q9NQ39 176 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 PSENENQ9NZ42 101 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 KLF2Q9Y5W3 355 aaPredicted RBP9.18□□□□□ -0.94
DDX56-203ENST00000421223 TRBV6-6A0A0A6YYG2 114 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 CGAP01215 116 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 ZNF585BQ52M93 769 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 RSG1Q9BU20 258 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 LIN7CQ9NUP9 197 aaKnown RBP9.18□□□□□ -0.94
DDX56-203ENST00000421223 ABCA4P78363 2273 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 SYNGR2O43760 224 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 CD5P06127 495 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 PLA2G5P39877 138 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 DVL1P1P54792 670 aaPredicted RBP9.18□□□□□ -0.94
DDX56-203ENST00000421223 PAX9P55771 341 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 WFDC8Q8IUA0 241 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 C1orf162Q8NEQ5 155 aaPredicted RBP9.18□□□□□ -0.94
DDX56-203ENST00000421223 ITLN1Q8WWA0 313 aa9.18□□□□□ -0.94
DDX56-203ENST00000421223 SPTBN4Q9H254 2564 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 OOEPA6NGQ2 149 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 C17orf98A8MV24 154 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 MKRN2OSH3BPM6 223 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 IFNA5P01569 189 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
DDX56-203ENST00000421223 S100A12P80511 92 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 C1orf185Q5T7R7 199 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms