RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 RAB19A4D1S5 217 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 KCNAB3O43448 404 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 TCF15Q12870 199 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 SEMA5BQ9P283 1151 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 TNRC6AQ8NDV7 1962 aaKnown RBP9.2□□□□□ -0.94
PTCH1-206ENST00000421141 NPIPB9F8W1W9 429 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 CST4P01036 141 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 PTHLHP12272 177 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 USF2Q15853 346 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM186Q96B77 213 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 METRNQ9UJH8 293 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 ANKRD20A5PA0PJZ0 165 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 C17orf51A8MQB3 221 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 Q6ZS92 163 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 THBDP07204 575 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 USF1P22415 310 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-206ENST00000421141 CDKN1AP38936 164 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 ABLIM2Q6H8Q1 611 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 C16orf82Q7Z2V1 217 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 AUP1Q9Y679 476 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 IGHV3OR16-10A0A075B7F0 116 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 DBX1A6NMT0 343 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 WNT9BO14905 357 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 C1QBP02746 253 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 FCGR3AP08637 254 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 RPL8P62917 257 aaKnown RBP9.19□□□□□ -0.94
PTCH1-206ENST00000421141 FAM122BQ7Z309 247 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 PIP4P1Q86T03 277 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 MMD2Q8IY49 270 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 PNKDQ8N490 385 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 WDR89Q96FK6 387 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-206ENST00000421141 C20orf202A1L168 122 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 RPL27AP46776 148 aaKnown RBP9.19□□□□□ -0.94
PTCH1-206ENST00000421141 P2RX3P56373 397 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 BVESQ8NE79 360 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 DLL3Q9NYJ7 618 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 TRAV39A0A0B4J263 110 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 A0A0G2JNJ9 132 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 KRBOX1C9JBD0 128 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 GALR1P47211 349 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 GZMKP49863 264 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 ENDOGQ14249 297 aaKnown RBP9.19□□□□□ -0.94
PTCH1-206ENST00000421141 ABHD14BQ96IU4 210 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 Q9UFV3 132 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 ERVFC1-1P60608 527 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 GUCA2BQ16661 112 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 FAM106AQ4KMX7 169 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM165Q9HC07 324 aa9.19□□□□□ -0.94
PTCH1-206ENST00000421141 ZNF727A8MUV8 499 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 S100A8P05109 93 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 ACP7Q6ZNF0 438 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 LURAP1Q96LR2 239 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 J3QKU1 62 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 SOX15O60248 233 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 RAMP1O60894 148 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 UNQ5815/PRO19632Q6UWF5 114 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 FAM90A1Q86YD7 464 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM123Q8N131 208 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 OR51I2Q9H344 312 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 PSG2P11465 335 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 RAG2P55895 527 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 RTN4RL2Q86UN3 420 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 C1QTNF5Q9BXJ0 243 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 IGHV3-72A0A0B4J1Y9 119 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 SYNGR2O43760 224 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 CELA3BP08861 270 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM33P57088 247 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 ATP5G2Q06055 141 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 DNM1P46Q6ZS02 220 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 BAGE2Q86Y30 109 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 OR2C3Q8N628 320 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 MITD1Q8WV92 249 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 SLC35E4Q6ICL7 350 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 NCCRP1Q6ZVX7 275 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-206ENST00000421141 WFDC6Q9BQY6 131 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 HSF4Q9ULV5 492 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 MDS2Q8NDY4 140 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 RPUSD4Q96CM3 377 aaKnown RBP9.18□□□□□ -0.94
PTCH1-206ENST00000421141 ABHD1Q96SE0 405 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 PINLYPA6NC86 204 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 PCP4L1A6NKN8 68 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 CDRT15L2A8MXV6 281 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 HTN1P15515 57 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 TPPP2P59282 170 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 CYB5R2Q6BCY4 276 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 RFLNBQ8N5W9 214 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
PTCH1-206ENST00000421141 HDHD3Q9BSH5 251 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-206ENST00000421141 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 DTD1Q8TEA8 209 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 JPT1Q9UK76 154 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 PDGFAP04085 211 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 DYNLT3P51808 116 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 OR4C12Q96R67 309 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 ERVS71-1P61550 626 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms