RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
MSH6-203ENST00000420813 OR10K2Q6IF99 312 aa13.5□□□□□ -0.25
MSH6-203ENST00000420813 MINDY2Q8NBR6 621 aa13.5□□□□□ -0.25
MSH6-203ENST00000420813 OR1N2Q8NGR9 330 aa13.5□□□□□ -0.25
MSH6-203ENST00000420813 GHITMQ9H3K2 345 aa13.5□□□□□ -0.25
MSH6-203ENST00000420813 GNB4Q9HAV0 340 aa13.5□□□□□ -0.25
MSH6-203ENST00000420813 ZNF256Q9Y2P7 627 aaPredicted RBP13.5□□□□□ -0.25
MSH6-203ENST00000420813 OR5H14A6NHG9 310 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 TMEM14DPA8MWL7 114 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 ITGB1BP1O14713 200 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 SLC22A1O15245 554 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 SRMP19623 302 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 RAB9AP51151 201 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 QRFPP83859 136 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 ZNF660Q6AZW8 331 aaPredicted RBP13.49□□□□□ -0.25
MSH6-203ENST00000420813 FAM131AQ6UXB0 335 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 TCTEX1D1Q8N7M0 179 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 IL1F10Q8WWZ1 152 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 NICN1Q9BSH3 213 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 TMED9Q9BVK6 235 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 VCX3BQ9H321 246 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 RIMS4Q9H426 269 aaPredicted RBP13.49□□□□□ -0.25
MSH6-203ENST00000420813 SLC23A1Q9UHI7 598 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 LSM2Q9Y333 95 aaKnown RBP13.49□□□□□ -0.25
MSH6-203ENST00000420813 U3KQK5 164 aa13.49□□□□□ -0.25
MSH6-203ENST00000420813 STAB2Q8WWQ8 2551 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 TRBV6-6A0A0A6YYG2 114 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 ST8SIA5O15466 376 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 BPNT1O95861 308 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 MC5RP33032 325 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 SPHARQ15513 63 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 HSD17B12Q53GQ0 312 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 C19orf54Q5BKX5 351 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 OR6M1Q8NGM8 313 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 VCXQ9H320 206 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 CHMP1AQ9HD42 196 aaPredicted RBP13.48□□□□□ -0.25
MSH6-203ENST00000420813 PLEKHJ1Q9NW61 149 aa13.48□□□□□ -0.25
MSH6-203ENST00000420813 RRHO14718 337 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 RBBP9O75884 186 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 UCHL1P09936 223 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 GNB1P62873 340 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 NDPQ00604 133 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 CEACAM19Q7Z692 300 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 ZNF429Q86V71 674 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 MGAT4AQ9UM21 535 aa13.47□□□□□ -0.25
MSH6-203ENST00000420813 FOXA2Q9Y261 457 aaPredicted RBP13.47□□□□□ -0.25
MSH6-203ENST00000420813 A0A1W2PN81 502 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 H0YJW9 148 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 CT45A6P0DMU7 189 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 CT45A5P0DMU8 189 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 CT45A7P0DMV0 189 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 CHRNA7P36544 502 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 ECSCRQ19T08 205 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 OR5AN1Q8NGI8 311 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 SETD6Q8TBK2 473 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 EDARADDQ8WWZ3 215 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 OR5B12Q96R08 314 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 RNF5Q99942 180 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 AGMATQ9BSE5 352 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
MSH6-203ENST00000420813 LPAR5Q9H1C0 372 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 KCNK15Q9H427 330 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 FBXL15Q9H469 300 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 WASHC3Q9Y3C0 194 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 FBXO7Q9Y3I1 522 aa13.46□□□□□ -0.25
MSH6-203ENST00000420813 A0A0A6YYD4 124 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 PTGES3LE9PB15 166 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 OVOL1O14753 267 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 SOX15O60248 233 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 GSTP1P09211 210 aaKnown RBP13.45□□□□□ -0.26
MSH6-203ENST00000420813 ZBTB25P24278 435 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 CX3CL1P78423 397 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 HLA-DRB3P79483 266 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 TMEM267Q0VDI3 215 aaPredicted RBP13.45□□□□□ -0.26
MSH6-203ENST00000420813 PLGLAQ15195 96 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 MED22Q15528 200 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 PYHIN1Q6K0P9 492 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 FAM89BQ8N5H3 189 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 UFD1Q92890 307 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 PARP12Q9H0J9 701 aaKnown RBP13.45□□□□□ -0.26
MSH6-203ENST00000420813 ISYNA1Q9NPH2 558 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 SCN3BQ9NY72 215 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 RNF150Q9ULK6 438 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 HSF4Q9ULV5 492 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 NUBP2Q9Y5Y2 271 aa13.45□□□□□ -0.26
MSH6-203ENST00000420813 SLC17A2O00624 439 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 SOCS1O15524 211 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 LGALS1P09382 135 aaKnown RBP13.44□□□□□ -0.26
MSH6-203ENST00000420813 IRF3Q14653 427 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 PTX4Q96A99 478 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 ABHD14BQ96IU4 210 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 TOLLIPQ9H0E2 274 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 AK3Q9UIJ7 227 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 SMAD5-AS1Q9Y6J3 95 aa13.44□□□□□ -0.26
MSH6-203ENST00000420813 RYR3Q15413 4870 aa13.43□□□□□ -0.26
MSH6-203ENST00000420813 FOXI3A8MTJ6 420 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms