RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ODAMA1E959 279 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 CYB5R3P00387 301 aaPredicted RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 PERPQ96FX8 193 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF488Q96MN9 340 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 GFI1Q99684 422 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 CARHSP1Q9Y2V2 147 aaKnown RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF729A6NN14 1252 aaPredicted RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 CCDC144NLQ6NUI1 221 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 SLC24A4Q8NFF2 622 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 HARBI1Q96MB7 349 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 MSL2Q9HCI7 577 aa12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 CISD1Q9NZ45 108 aaKnown RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 SLC25A10Q9UBX3 287 aaPredicted RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
AP000550.1-201ENST00000420508 PQLC2LA1A4F0 135 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 A8MXK9 166 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 LDLRAD4O15165 306 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 SRP14P37108 136 aaKnown RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 ACSM6Q6P461 480 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF705AQ6ZN79 300 aaPredicted RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 BSCL2Q96G97 398 aaPredicted RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 PRR32B1ATL7 298 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 BRS3P32247 399 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 FAM166AQ6J272 317 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 C19orf35Q6ZS72 473 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 CBLN2Q8IUK8 224 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 TAF15Q92804 592 aaKnown RBP eCLIP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 GNB4Q9HAV0 340 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 C17orf51A8MQB3 221 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 BATFQ16520 125 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 TIMM23BQ5SRD1 257 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF714Q96N38 554 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 LRRC3CA6NJW4 275 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 J3QR06 171 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 FGFRL1Q8N441 504 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 GGACTQ9BVM4 153 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 FOXD3Q9UJU5 478 aaPredicted RBP12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 OR51B2Q9Y5P1 312 aa12.68□□□□□ -0.38
AP000550.1-201ENST00000420508 FAM3BP58499 235 aaPredicted RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 PITPNC1Q9UKF7 332 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 Q5BKY6 102 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 OR2V2Q96R30 315 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 ETV2O00321 342 aaPredicted RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 PPIHO43447 177 aaKnown RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 RFPL3SP0C7P2 107 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF735P0CB33 412 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 RPL31P62899 125 aaKnown RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 PAX5Q02548 391 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 C4orf17Q53FE4 359 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 IDI2-AS1Q9NZ38 188 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 PTBP3O95758 552 aaKnown RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 CLEC9AQ6UXN8 241 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 PUSL1Q8N0Z8 303 aaKnown RBP12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 RBKSQ9H477 322 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 TMEM56-RWDD3S4R434 201 aa12.67□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF716A6NP11 495 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 CRYBA1P05813 215 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 CRYGSP22914 178 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF818PQ6ZRF7 136 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 DBX1A6NMT0 343 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 IQCF6A8MYZ5 107 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 NKX2-8O15522 239 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 GLRXP35754 106 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 LHX2P50458 406 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 SUMO1P63165 101 aaKnown RBP12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 CALYQ9NYX4 217 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 SMPD2O60906 423 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 HSBP1O75506 76 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 KLF7O75840 302 aaPredicted RBP12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 CLDN18P56856 261 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 ERVFRD-1P60508 538 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 PDZD11Q5EBL8 140 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 MS4A3Q96HJ5 214 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 RTN4RQ9BZR6 473 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
AP000550.1-201ENST00000420508 PLPPR2Q96GM1 343 aa12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 FAM78BQ5VT40 261 aa12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 FOXL2NBQ6ZUU3 175 aa12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 CDX4O14627 284 aaPredicted RBP12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 ZNF205O95201 554 aa12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 RBP4P02753 201 aa12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 C1QL2Q7Z5L3 287 aa12.65□□□□□ -0.38
AP000550.1-201ENST00000420508 NAT8BQ9UHF3 227 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms