RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 MRPS18BQ9Y676 258 aaKnown RBP4.05□□□□□ -1.76
VPS13A-207ENST00000419472 CEP250Q9BV73 2442 aa4.05□□□□□ -1.76
VPS13A-207ENST00000419472 TICRRQ7Z2Z1 1910 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 A0A0G2JN53 185 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 KANTRA0A1W2PQU2 76 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 C7orf77A4D0Y5 90 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 DUS4LO95620 317 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 GCGP01275 180 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 EIF4EP06730 217 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 PRSS1P07477 247 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 CEBPGP53567 150 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 CDC42P60953 191 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ARF6P62330 175 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 BCL2L1Q07817 233 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 KIAA0040Q15053 153 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 GFI1BQ5VTD9 330 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 TRAPPC5Q8IUR0 188 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 MSRB3Q8IXL7 192 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 OR4S1Q8NGB4 309 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ORAOV1Q8WV07 137 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 EEF1AKMT1Q8WVE0 214 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 FGF14Q92915 247 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BLQ99880 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SYT4Q9H2B2 425 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HEBP1Q9NRV9 189 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 CBLN4Q9NTU7 201 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 NAGKQ9UJ70 344 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 RARRES3Q9UL19 164 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 OR51B4Q9Y5P0 310 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ANAPC1Q9H1A4 1944 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 PIKFYVEQ9Y2I7 2098 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 TRAV14DV4A0A0A6YYC5 116 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ZNF816-ZNF321PA0A0X1KG74 233 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 NAP1L6A6NFF2 107 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 MAGEB4O15481 346 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BKO60814 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 IFNA21P01568 189 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BJP06899 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BOP23527 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BBP33778 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 AKR1C3P42330 323 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 GDF5P43026 501 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 RPL29P47914 159 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 PRLHRP49683 370 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BDP58876 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SNRPGP62308 76 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BCP62807 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 PITPNAQ00169 270 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 NUMA1Q14980 2115 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 RHEBQ15382 184 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SLC9A3R2Q15599 337 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST2H2BEQ16778 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 C5orf64Q2M2E5 130 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 VAX1Q5SQQ9 334 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 KHDRBS2Q5VWX1 349 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 TMEM215Q68D42 235 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 EIF5AL1Q6IS14 154 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 UNQ9370/PRO34162Q6UXP9 181 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 Q6ZN92 141 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST2H3AQ71DI3 136 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SLC35E3Q7Z769 313 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ARIH2OSQ8N7S6 290 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 OR6N2Q8NGY6 317 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 OR51Q1Q8NH59 317 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HAVCR2Q8TDQ0 301 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BHQ93079 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 CMBLQ96DG6 245 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 TMEM56Q96MV1 263 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BNQ99877 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HIST1H2BMQ99879 126 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 FAAP24Q9BTP7 215 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 RIOK2Q9BVS4 552 aaKnown RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 HES7Q9BYE0 225 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SLC25A31Q9H0C2 315 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 RHOFQ9HBH0 211 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SLC25A37Q9NYZ2 338 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 SLC7A11Q9UPY5 501 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 PRSS21Q9Y6M0 314 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 TMEM56-RWDD3S4R434 201 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ANKRD36A6QL64 1941 aa4.04□□□□□ -1.76
VPS13A-207ENST00000419472 NUP214P35658 2090 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-207ENST00000419472 ANKRD20A5PA0PJZ0 165 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 CD74P04233 296 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SLC25A4P12235 298 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 GZMHP20718 246 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TFPI2P48307 235 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TTPAP49638 278 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 CLDN6P56747 220 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 LMO4P61968 165 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 SNRPD1P62314 119 aaKnown RBP4.03□□□□□ -1.76
VPS13A-207ENST00000419472 BTG2P78543 158 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 RPL19P84098 196 aaKnown RBP4.03□□□□□ -1.76
VPS13A-207ENST00000419472 C1orf194Q5T5A4 169 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 HENMT1Q5T8I9 393 aaKnown RBP4.03□□□□□ -1.76
VPS13A-207ENST00000419472 DRAM2Q6UX65 266 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 C11orf42Q8N5U0 333 aa4.03□□□□□ -1.76
VPS13A-207ENST00000419472 TMEM105Q8N8V8 129 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms