RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 HSPA12AO43301 675 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
LINC00404-201ENST00000418660 SCTP09683 121 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 RAB6AP20340 208 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 PSMB9P28065 219 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 SLC6A1P30531 599 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
LINC00404-201ENST00000418660 ACTBP60709 375 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 MMDQ15546 238 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 TEX38Q6PEX7 206 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 EDARADDQ8WWZ3 215 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 RITA1Q96K30 269 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 HSPB9Q9BQS6 159 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 AGMATQ9BSE5 352 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 PARP12Q9H0J9 701 aaKnown RBP12.96□□□□□ -0.33
LINC00404-201ENST00000418660 OR1A1Q9P1Q5 309 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
LINC00404-201ENST00000418660 TRDCB7Z8K6 153 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 CD3GP09693 182 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 IGLL1P15814 213 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 GADD45AP24522 165 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 MRPS15P82914 257 aaKnown RBP12.95□□□□□ -0.34
LINC00404-201ENST00000418660 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 REC114Q7Z4M0 266 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 OR10R2Q8NGX6 335 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 PTX4Q96A99 478 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 PHF21AQ96BD5 680 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 ABHD14BQ96IU4 210 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 C11orf54Q9H0W9 315 aaPredicted RBP12.95□□□□□ -0.34
LINC00404-201ENST00000418660 ZNF107Q9UII5 783 aaPredicted RBP12.95□□□□□ -0.34
LINC00404-201ENST00000418660 ZNF580Q9UK33 172 aa12.95□□□□□ -0.34
LINC00404-201ENST00000418660 METTL21EPA6NDL7 271 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 RAB27BO00194 218 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 NBR2O15453 112 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 IGF1P05019 195 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 FOXE3Q13461 319 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 ZNF773Q6PK81 442 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 NR2C2APQ86WQ0 139 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 NPBQ8NG41 125 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 RCC1LQ96I51 464 aaKnown RBP12.94□□□□□ -0.34
LINC00404-201ENST00000418660 NECAP2Q9NVZ3 263 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 TXNL4BQ9NX01 149 aaKnown RBP12.94□□□□□ -0.34
LINC00404-201ENST00000418660 STUB1Q9UNE7 303 aa12.94□□□□□ -0.34
LINC00404-201ENST00000418660 IGKV1-6A0A0C4DH72 117 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 OR5H14A6NHG9 310 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 NUDT19A8MXV4 375 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 MFNGO00587 321 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 HLA-DRB1P01911 266 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
LINC00404-201ENST00000418660 ELANEP08246 267 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 OR5H8P0DN80 308 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 SLC2A2P11168 524 aaPredicted RBP12.93□□□□□ -0.34
LINC00404-201ENST00000418660 VDAC1P21796 283 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 CNTFRP26992 372 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 MC5RP33032 325 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 THBS3P49746 956 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 CFHR3Q02985 330 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 CXorf66Q5JRM2 361 aaPredicted RBP12.93□□□□□ -0.34
LINC00404-201ENST00000418660 FAM131AQ6UXB0 335 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 ETV3LQ6ZN32 361 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 C18orf65Q6ZTR6 163 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 ZNF695Q8IW36 515 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 LINC00482Q8N8I6 264 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 RNF152Q8N8N0 203 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 OR4A4PQ8NGN8 299 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 CHCHD6Q9BRQ6 235 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 SSR3Q9UNL2 185 aa12.93□□□□□ -0.34
LINC00404-201ENST00000418660 A0A0B4J203 849 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 NOTOA8MTQ0 251 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 H0YJW9 148 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 FABP7O15540 132 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 NDUFA3O95167 84 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 DUS4LO95620 317 aaKnown RBP12.92□□□□□ -0.34
LINC00404-201ENST00000418660 IGHG4P01861 327 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 RPLP1P05386 114 aaKnown RBP12.92□□□□□ -0.34
LINC00404-201ENST00000418660 FCGR3AP08637 254 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 HIST1H1DP16402 221 aaKnown RBP12.92□□□□□ -0.34
LINC00404-201ENST00000418660 GNB3P16520 340 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 MYCNOSP40205 109 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 SERPINB10P48595 397 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 KIR2DS1Q14954 304 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 LIN54Q6MZP7 749 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 GLDNQ6ZMI3 551 aaPredicted RBP12.92□□□□□ -0.34
LINC00404-201ENST00000418660 TPRA1Q86W33 373 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 MRPL41Q8IXM3 137 aaKnown RBP12.92□□□□□ -0.34
LINC00404-201ENST00000418660 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 RDH8Q9NYR8 311 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 RNF150Q9ULK6 438 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
LINC00404-201ENST00000418660 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms