RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 EXOSC2Q13868 293 aaKnown RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 SNTB1Q13884 538 aaKnown RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 PRAMEF5Q5TYX0 476 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 LYZL2Q7Z4W2 148 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 LILRB2Q8N423 598 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 OR52L2PQ8NGH6 319 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 TNFRSF14Q92956 283 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 NEIL1Q96FI4 390 aaPredicted RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 COA4Q9NYJ1 87 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 MED12LQ86YW9 2145 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 TXNL1O43396 289 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 PSPNO60542 156 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 NQO2P16083 231 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 ATP5IP56385 69 aaPredicted RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 TMEM33P57088 247 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 FAM122CQ6P4D5 195 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 RTN4RL2Q86UN3 420 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 LDLRAD3Q86YD5 345 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 OR2C3Q8N628 320 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 DRAM1Q8N682 238 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 OR13A1Q8NGR1 328 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 RFESDQ8TAC1 157 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 LHFPL5Q8TAF8 219 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 RALYQ9UKM9 306 aaKnown RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 ARHGAP21Q5T5U3 1957 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 IGKV1D-17A0A075B6S4 117 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 PPIHO43447 177 aaKnown RBP7.01□□□□□ -1.29
USP54-203ENST00000418501 LYL1P12980 280 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 PPP1CCP36873 323 aaKnown RBP7.01□□□□□ -1.29
USP54-203ENST00000418501 CEACAM3P40198 252 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 RAB31Q13636 194 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 PXDC1Q5TGL8 231 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 LURAP1LQ8IV03 231 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 PINX1Q96BK5 328 aaKnown RBP7.01□□□□□ -1.29
USP54-203ENST00000418501 MSI2Q96DH6 328 aaKnown RBP7.01□□□□□ -1.29
USP54-203ENST00000418501 KAAG1Q9UBP8 84 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 FBXO7Q9Y3I1 522 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 SHISA9B4DS77 424 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 ERVFRD-1P60508 538 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 TMEM186Q96B77 213 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 COQ2Q96H96 371 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 UMAD1C9J7I0 102 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 ATXN7O15265 892 aaPredicted RBP7.01□□□□□ -1.29
USP54-203ENST00000418501 IFNA17P01571 189 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 MBPP02686 304 aaPredicted RBP7.01□□□□□ -1.29
USP54-203ENST00000418501 MC5RP33032 325 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 F2RL1P55085 397 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 TMEM155Q4W5P6 130 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 PCSK4Q6UW60 755 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 C20orf204Q6ZNR8 217 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 OR11H4Q8NGC9 324 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 ZNF596Q8TC21 504 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 APC2O95996 2303 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 C17orf112F2Z3M2 114 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 EGR1P18146 543 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 CXCL2P19875 107 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 LYG1Q8N1E2 194 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 COMMD1Q8N668 190 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 LFNGQ8NES3 379 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 OR13D1Q8NGV5 346 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 STOML3Q8TAV4 291 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 GAFA1Q96PS6 74 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 TP53RKQ96S44 253 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 PBDC1Q9BVG4 233 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 HEXA-AS1Q9H8Q6 139 aa7.01□□□□□ -1.29
USP54-203ENST00000418501 CYB5BO43169 146 aa7□□□□□ -1.29
USP54-203ENST00000418501 SYNGR2O43760 224 aa7□□□□□ -1.29
USP54-203ENST00000418501 FGF2P09038 288 aa7□□□□□ -1.29
USP54-203ENST00000418501 ADORA2A-AS1P86434 159 aa7□□□□□ -1.29
USP54-203ENST00000418501 CR1LQ2VPA4 569 aa7□□□□□ -1.29
USP54-203ENST00000418501 AKR1C8PQ5T2L2 129 aa7□□□□□ -1.29
USP54-203ENST00000418501 LAMTOR1Q6IAA8 161 aa7□□□□□ -1.29
USP54-203ENST00000418501 MRGPRFQ96AM1 343 aa7□□□□□ -1.29
USP54-203ENST00000418501 R3HDM4Q96D70 268 aa7□□□□□ -1.29
USP54-203ENST00000418501 OR10C1Q96KK4 312 aa7□□□□□ -1.29
USP54-203ENST00000418501 PSENENQ9NZ42 101 aa7□□□□□ -1.29
USP54-203ENST00000418501 CACNG5Q9UF02 275 aa7□□□□□ -1.29
USP54-203ENST00000418501 WSB1Q9Y6I7 421 aa7□□□□□ -1.29
USP54-203ENST00000418501 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
USP54-203ENST00000418501 SSSCA1O60232 199 aa7□□□□□ -1.29
USP54-203ENST00000418501 HBE1P02100 147 aa7□□□□□ -1.29
USP54-203ENST00000418501 GPR6P46095 362 aaPredicted RBP7□□□□□ -1.29
USP54-203ENST00000418501 VMA21Q3ZAQ7 101 aa7□□□□□ -1.29
USP54-203ENST00000418501 MORN2Q502X0 79 aa7□□□□□ -1.29
USP54-203ENST00000418501 COMMD7Q86VX2 200 aa7□□□□□ -1.29
USP54-203ENST00000418501 ZNRF1Q8ND25 227 aa7□□□□□ -1.29
USP54-203ENST00000418501 OR9G1Q8NH87 305 aa7□□□□□ -1.29
USP54-203ENST00000418501 SAT2Q96F10 170 aaPredicted RBP7□□□□□ -1.29
USP54-203ENST00000418501 HS3ST6Q96QI5 342 aa7□□□□□ -1.29
USP54-203ENST00000418501 PRNDQ9UKY0 176 aa7□□□□□ -1.29
USP54-203ENST00000418501 GTF3C1Q12789 2109 aa7□□□□□ -1.29
USP54-203ENST00000418501 CDH23Q9H251 3354 aa7□□□□□ -1.29
USP54-203ENST00000418501 CLEC18AA5D8T8 446 aa7□□□□□ -1.29
USP54-203ENST00000418501 ACTL6BO94805 426 aa7□□□□□ -1.29
USP54-203ENST00000418501 SUB1P53999 127 aaKnown RBP eCLIP7□□□□□ -1.29
USP54-203ENST00000418501 HERPUD1Q15011 391 aa7□□□□□ -1.29
USP54-203ENST00000418501 CLEC18CQ8NCF0 446 aa7□□□□□ -1.29
USP54-203ENST00000418501 CITED4Q96RK1 184 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms