RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 GPR107Q5VW38 600 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 GPR141Q7Z602 305 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 LYG1Q8N1E2 194 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 Q8N2B8 174 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 DTX3Q8N9I9 347 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 OR2AK2Q8NG84 335 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 OR4A4PQ8NGN8 299 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 OR4C13Q8NGP0 309 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 OR56B4Q8NH76 319 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 RBM14Q96PK6 669 aaKnown RBP8.4□□□□□ -1.06
RFC1-203ENST00000418436 AGMATQ9BSE5 352 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 IFI27L2Q9H2X8 130 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 ZNF702PQ9H963 129 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 OR1A1Q9P1Q5 309 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 ZNF230Q9UIE0 474 aaPredicted RBP8.4□□□□□ -1.06
RFC1-203ENST00000418436 RNF114Q9Y508 228 aa8.4□□□□□ -1.06
RFC1-203ENST00000418436 IGKV1D-8A0A087WSZ0 117 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 TMEM235A6NFC5 223 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 FABP7O15540 132 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 SSX5O60225 188 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 AMY1AP04745 511 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 AMY2AP04746 511 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 LPLP06858 475 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 SNRNP70P08621 437 aaKnown RBP8.39□□□□□ -1.07
RFC1-203ENST00000418436 GSTT2P0CG29 244 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 GSTT2BP0CG30 244 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 CD1BP29016 333 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 TALDO1P37837 337 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 CEACAM6P40199 344 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 REG1BP48304 166 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 BLCAPP62952 87 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 PITPNAQ00169 270 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 UBE2NLQ5JXB2 153 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 ZNF833PQ6ZTB9 187 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 TGIF2LXQ8IUE1 241 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 IZUMO1Q8IYV9 350 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 CAPSLQ8WWF8 208 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 ZNF251Q9BRH9 671 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 SLC25A33Q9BSK2 321 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 CABLES2Q9BTV7 478 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 PARP12Q9H0J9 701 aaKnown RBP8.39□□□□□ -1.07
RFC1-203ENST00000418436 C11orf54Q9H0W9 315 aaPredicted RBP8.39□□□□□ -1.07
RFC1-203ENST00000418436 DCSTAMPQ9H295 470 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 GHITMQ9H3K2 345 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 DIABLOQ9NR28 239 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 SLC23A1Q9UHI7 598 aa8.39□□□□□ -1.07
RFC1-203ENST00000418436 TRAV18A0A075B6X5 111 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 TRBV6-7A0A0A0MS04 114 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 XRCC3O43542 346 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 IGKV1D-33P01593 117 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 IGKV1-33P01594 117 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 RPL5P46777 297 aaKnown RBP8.38□□□□□ -1.07
RFC1-203ENST00000418436 RORCP51449 518 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 IGSF11Q5DX21 431 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 FAM71F2Q6NXP2 309 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 MOB3BQ86TA1 216 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 Q8N6K4 173 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 SAMD12Q8N8I0 201 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 OR2T6Q8NHC8 308 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 NUDCD2Q8WVJ2 157 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 ACOT12Q8WYK0 555 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 MAFIPQ8WZ33 124 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 PHF21AQ96BD5 680 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 S100A16Q96FQ6 103 aaKnown RBP8.38□□□□□ -1.07
RFC1-203ENST00000418436 EAF1Q96JC9 268 aaPredicted RBP8.38□□□□□ -1.07
RFC1-203ENST00000418436 AKR1E2Q96JD6 320 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 CMTM3Q96MX0 182 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 PRSS22Q9GZN4 317 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 AUNIPQ9H7T9 357 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 PIPOXQ9P0Z9 390 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 SIGLEC9Q9Y336 463 aa8.38□□□□□ -1.07
RFC1-203ENST00000418436 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 ZNF736B4DX44 427 aaPredicted RBP8.37□□□□□ -1.07
RFC1-203ENST00000418436 M0QZK8 103 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 RAB29O14966 203 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 HSPA12AO43301 675 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 PROP1O75360 226 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
RFC1-203ENST00000418436 TMEM11P17152 192 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 OR3A3P47888 321 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 TMBIM6P55061 237 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 GNG2P59768 71 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 LSAMPQ13449 338 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 OR2T10Q8NGZ9 312 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 ABHD14BQ96IU4 210 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 CITED1Q99966 193 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 NABP2Q9BQ15 211 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 BCL7BQ9BQE9 202 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 SERTAD4Q9NUC0 356 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 RDH8Q9NYR8 311 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 GAB2Q9UQC2 676 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 MOB4Q9Y3A3 225 aa8.37□□□□□ -1.07
RFC1-203ENST00000418436 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 BET1O15155 118 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 FGF16O43320 207 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 APOA1P02647 267 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 ZNF182P17025 639 aaPredicted RBP8.36□□□□□ -1.07
RFC1-203ENST00000418436 SRSF4Q08170 494 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms