RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PVALBP20472 110 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-205ENST00000417664 PPOXP50336 477 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 RAB7AP51149 207 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 TGIF2LYQ8IUE0 185 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 DCAF16Q9NXF7 216 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 TAS2R3Q9NYW6 316 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 KAAG1Q9UBP8 84 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 LPAR3Q9UBY5 353 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 GAB2Q9UQC2 676 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 LAMP3Q9UQV4 416 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 ROS1P08922 2347 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 MSGN1A6NI15 193 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 TNFRSF13BO14836 293 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-205ENST00000417664 SELLP14151 372 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 ID3Q02535 119 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 ZNF585BQ52M93 769 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 ALKAL2Q6UX46 152 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 FAM216BQ8N7L0 139 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 OR10A7Q8NGE5 316 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 CD300LFQ8TDQ1 290 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 SLC25A32Q9H2D1 315 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 ZC4H2Q9NQZ6 224 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 RNF150Q9ULK6 438 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 LINC00312Q9Y6C7 94 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 DIDO1Q9BTC0 2240 aaKnown RBP13.92□□□□□ -0.18
SSBP3-205ENST00000417664 ADGRG4Q8IZF6 3080 aa13.92□□□□□ -0.18
SSBP3-205ENST00000417664 IGHV3-43A0A0B4J1X8 118 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 IGHV3-43DP0DP04 118 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 HFEQ30201 348 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 RNASE11Q8TAA1 199 aaKnown RBP13.91□□□□□ -0.18
SSBP3-205ENST00000417664 GFOD1Q9NXC2 390 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 SLC25A10Q9UBX3 287 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-205ENST00000417664 PSG11Q9UQ72 335 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 TANC2Q9HCD6 1990 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 COL6A6A6NMZ7 2263 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 ARFGEF3Q5TH69 2177 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 KCNAB3O43448 404 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 GPR137BO60478 399 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 PITX3O75364 302 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 CLDN1O95832 211 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 ZNF16P17020 682 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-205ENST00000417664 BAP18Q8IXM2 172 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-205ENST00000417664 CYTL1Q9NRR1 136 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 SDHAF2Q9NX18 166 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 AUP1Q9Y679 476 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 NBASA2RRP1 2371 aa13.91□□□□□ -0.18
SSBP3-205ENST00000417664 TPRP12270 2363 aaKnown RBP13.91□□□□□ -0.18
SSBP3-205ENST00000417664 A0A1B0GW55 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 IGKV1-39P01597 117 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 GAPDHP04406 335 aaKnown RBP13.9□□□□□ -0.18
SSBP3-205ENST00000417664 IGKV1D-39P04432 117 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L2P0CJ85 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L3P0CJ86 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L4P0CJ87 422 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L5P0CJ88 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L6P0CJ89 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L7P0CJ90 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 GPR12P47775 334 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 AKR1C2P52895 323 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 LRRC10Q5BKY1 277 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4L9Q6RFH8 374 aaPredicted RBP13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DMBX1Q8NFW5 382 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 GPR146Q96CH1 333 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 GAL3ST2Q9H3Q3 398 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 MED9Q9NWA0 146 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 COA4Q9NYJ1 87 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DUX4Q9UBX2 424 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 RCL1Q9Y2P8 373 aaKnown RBP13.9□□□□□ -0.18
SSBP3-205ENST00000417664 PKD1L2Q7Z442 2459 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 DSCAML1Q8TD84 2053 aa13.9□□□□□ -0.18
SSBP3-205ENST00000417664 HCFC1P51610 2035 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 ST8SIA5O15466 376 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 NDUFB3O43676 98 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 JTBO76095 146 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 NDUFB7P17568 137 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 EIF5AL1Q6IS14 154 aaKnown RBP13.89□□□□□ -0.19
SSBP3-205ENST00000417664 LRRC20Q8TCA0 184 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 ITLN2Q8WWU7 325 aaPredicted RBP13.89□□□□□ -0.19
SSBP3-205ENST00000417664 C5orf30Q96GV9 206 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 C11orf1Q9H5F2 150 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 CBLN4Q9NTU7 201 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 MMP24Q9Y5R2 645 aa13.89□□□□□ -0.19
SSBP3-205ENST00000417664 RAI1Q7Z5J4 1906 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-205ENST00000417664 NMBP08949 121 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 GNLYP22749 145 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 LPAR6P43657 344 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 RPL31P62899 125 aaKnown RBP13.88□□□□□ -0.19
SSBP3-205ENST00000417664 LTC4SQ16873 150 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 Q3ZCU0 254 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 FAM53AQ6NSI3 398 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-205ENST00000417664 TCF23Q7RTU1 214 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 TCTEX1D2Q8WW35 142 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 ABHD14AQ9BUJ0 271 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 SLC25A31Q9H0C2 315 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 ARID1AO14497 2285 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms