RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 EHFQ9NZC4 300 aa17.47■□□□□ 0.39
AP1S3-205ENST00000415298 CKLFQ9UBR5 152 aa17.47■□□□□ 0.39
AP1S3-205ENST00000415298 LOC102723996A0A087X1L8 192 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 ZIC2O95409 532 aaPredicted RBP17.46■□□□□ 0.39
AP1S3-205ENST00000415298 ATP6V0CP27449 155 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 MTCP1P56278 107 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 KCNIP4Q6PIL6 250 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 ANAPC16Q96DE5 110 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 P2RX4Q99571 388 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 MCHR1Q99705 422 aa17.46■□□□□ 0.39
AP1S3-205ENST00000415298 PEF1Q9UBV8 284 aaKnown RBP17.46■□□□□ 0.39
AP1S3-205ENST00000415298 DUSP1P28562 367 aa17.46■□□□□ 0.38
AP1S3-205ENST00000415298 SIGLEC12Q96PQ1 595 aa17.46■□□□□ 0.38
AP1S3-205ENST00000415298 NXF5Q9H1B4 397 aaKnown RBP17.46■□□□□ 0.38
AP1S3-205ENST00000415298 C19orf25Q9UFG5 118 aaPredicted RBP17.46■□□□□ 0.38
AP1S3-205ENST00000415298 GAGE10A6NGK3 116 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 C21orf140B9A014 251 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 SERF1AO75920 110 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 TACSTD2P09758 323 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 C1QTNF9P0C862 333 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 ATP1A1-AS1Q5TC04 95 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 ZAR1Q86SH2 424 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 METTL7AQ9H8H3 244 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 GNG13Q9P2W3 67 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 COPS7AQ9UBW8 275 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 SS18L2Q9UHA2 77 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 LIFP15018 202 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 PLP1P60201 277 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 LCN6P62502 163 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 CYP2G1PQ6ZSU1 146 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 SIGLECL1Q8N7X8 197 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 OR51L1Q8NGJ5 315 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 IMMP1LQ96LU5 166 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 DERL1Q9BUN8 251 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 C1orf123Q9NWV4 160 aa17.45■□□□□ 0.38
AP1S3-205ENST00000415298 TRAV8-6A0A0B4J262 113 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 NKX2-2O95096 273 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 IGKV1D-16P01601 117 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 BCL2P10415 239 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 ZNF684Q5T5D7 378 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 UFSP1Q6NVU6 142 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 PRR22Q8IZ63 422 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 OR10G3Q8NGC4 313 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 HOXB13Q92826 284 aaPredicted RBP17.44■□□□□ 0.38
AP1S3-205ENST00000415298 AGMATQ9BSE5 352 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 LMF2Q9BU23 707 aaKnown RBP17.44■□□□□ 0.38
AP1S3-205ENST00000415298 THYN1Q9P016 225 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 A0A0U1RQK1 487 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 IFI6P09912 130 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 WT1P19544 449 aaPredicted RBP17.44■□□□□ 0.38
AP1S3-205ENST00000415298 OMGP23515 440 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 ZNF266Q14584 549 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 GTF2H5Q6ZYL4 71 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 SDF2Q99470 211 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 RNF114Q9Y508 228 aa17.44■□□□□ 0.38
AP1S3-205ENST00000415298 MED13Q9UHV7 2174 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 TRAV1-1A0A0B4J248 108 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 SH2D1BO14796 132 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 PI3P19957 117 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 ADGRE4PQ86SQ3 457 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 OR5A2Q8NGI9 324 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 CENPVL1A0A0U1RR11 272 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 GRIFINA4D1Z8 144 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 PDE6DO43924 150 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 HLA-HP01893 362 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 IL3RAP26951 378 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 DCST2Q5T1A1 773 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 ATP5SQ99766 215 aa17.43■□□□□ 0.38
AP1S3-205ENST00000415298 APC2O95996 2303 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 NSG1A0A0A6YYJ2 146 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 ZNF93P35789 620 aaPredicted RBP17.42■□□□□ 0.38
AP1S3-205ENST00000415298 CDKN2AP42771 156 aaKnown RBP17.42■□□□□ 0.38
AP1S3-205ENST00000415298 HSD52Q0P140 79 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 Q0VFX4 171 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 MOB1AQ9H8S9 216 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 ARID1AO14497 2285 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 ZNF253O75346 499 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 AADACP22760 399 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 ZNF117Q03924 483 aa17.42■□□□□ 0.38
AP1S3-205ENST00000415298 PSMG3Q9BT73 122 aaPredicted RBP17.42■□□□□ 0.38
AP1S3-205ENST00000415298 SSBP2P81877 361 aaPredicted RBP17.41■□□□□ 0.38
AP1S3-205ENST00000415298 LTC4SQ16873 150 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 MPV17L2Q567V2 206 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 OR2AE1Q8NHA4 323 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 SMIM7Q9BQ49 75 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 DOCK10Q96BY6 2186 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 CNTRLQ7Z7A1 2325 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 C2orf72A6NCS6 295 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 PRR32B1ATL7 298 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 CD5LO43866 347 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 UPK3AO75631 287 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 ADMP35318 185 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 PLA2G5P39877 138 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 RPL23P62829 140 aaKnown RBP17.41■□□□□ 0.38
AP1S3-205ENST00000415298 ZNF676Q8N7Q3 588 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 BCORP1Q8N888 145 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 OR10AC1Q8NH08 325 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 CITED1Q99966 193 aa17.41■□□□□ 0.38
AP1S3-205ENST00000415298 MGAQ8IWI9 3026 aa17.4■□□□□ 0.38
AP1S3-205ENST00000415298 ACACAQ13085 2346 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms