RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 HEATR5AQ86XA9 2040 aa8□□□□□ -1.13
SNHG3-201ENST00000413987 LRP5LA4QPB2 252 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 OR5H15A6NDH6 313 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 OR5H1A6NKK0 313 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 CEACAM18A8MTB9 384 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 K7EPK0 472 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 TNFSF11O14788 317 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 RPL12P30050 165 aaKnown RBP7.99□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM50BP56557 158 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 RPS23P62266 143 aaKnown RBP7.99□□□□□ -1.13
SNHG3-201ENST00000413987 IL15RAQ13261 267 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 PQLC2Q6ZP29 291 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 TMPPEQ6ZT21 453 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 FAM71E2Q8N5Q1 922 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF441Q8N8Z8 693 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 OR10X1Q8NGY0 326 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 MUCL1Q96DR8 90 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 OR8B4Q96RC9 309 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.99□□□□□ -1.13
SNHG3-201ENST00000413987 NBEAQ8NFP9 2946 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 NCOR2Q9Y618 2525 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 BORCS7-ASMTA0A0B4J1R7 106 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 A0A1W2PRF3 423 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 A0A1W2PRM7 423 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 ADH4P08319 380 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 DNASE1L1P49184 302 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 DAP3P51398 398 aaKnown RBP7.99□□□□□ -1.13
SNHG3-201ENST00000413987 NHLH2Q02577 135 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 SURF2Q15527 256 aaPredicted RBP7.99□□□□□ -1.13
SNHG3-201ENST00000413987 VAX1Q5SQQ9 334 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 WFDC8Q8IUA0 241 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 HIST3H2BBQ8N257 126 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 JAGN1Q8N5M9 183 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 CHST4Q8NCG5 386 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 RPEQ96AT9 228 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 DNAJA3Q96EY1 480 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 SCRT1Q9BWW7 348 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 C1orf123Q9NWV4 160 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 MED13Q9UHV7 2174 aa7.99□□□□□ -1.13
SNHG3-201ENST00000413987 SMG1Q96Q15 3661 aaKnown RBP7.99□□□□□ -1.13
SNHG3-201ENST00000413987 APC2O95996 2303 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 PCNX3Q9H6A9 2034 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 NSG1A0A0A6YYJ2 146 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF724A8MTY0 619 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM50AO95807 157 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF84P51523 738 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 RRADP55042 308 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 S100A10P60903 97 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 NUTF2P61970 127 aaKnown RBP7.98□□□□□ -1.13
SNHG3-201ENST00000413987 UBE2V2Q15819 145 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 GABRA6Q16445 453 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ALG10Q5BKT4 473 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 MESTQ5EB52 335 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 SOHLH1Q5JUK2 328 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 MARCH3Q86UD3 253 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 GJC3Q8NFK1 279 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 SEMA6DQ8NFY4 1073 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 OR5L1Q8NGL2 311 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 OR4K15Q8NH41 348 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 OTOSQ8NHW6 89 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 TIMD4Q96H15 378 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 SLC25A44Q96H78 314 aaPredicted RBP7.98□□□□□ -1.13
SNHG3-201ENST00000413987 IMMP1LQ96LU5 166 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ARV1Q9H2C2 271 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 TAS2R4Q9NYW5 299 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 C19orf25Q9UFG5 118 aaPredicted RBP7.98□□□□□ -1.13
SNHG3-201ENST00000413987 MED12Q93074 2177 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 PIEZO2Q9H5I5 2752 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF726A6NNF4 738 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 H0YL77 283 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 K7EN84 100 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 PMP2P02689 132 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 F13BP05160 661 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 WT1P19544 449 aaPredicted RBP7.98□□□□□ -1.13
SNHG3-201ENST00000413987 FCGR2CP31995 323 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 PPOXP50336 477 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 EWSR1Q01844 656 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNHG3-201ENST00000413987 PAX2Q02962 417 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF616Q08AN1 781 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 FOXC1Q12948 553 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 KCTD18Q6PI47 426 aaPredicted RBP7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF440Q8IYI8 595 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 LGI3Q8N145 548 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM217Q8N7C4 229 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 GVQW1Q8N7I0 195 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 SUMF2Q8NBJ7 301 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 OR10G3Q8NGC4 313 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM37Q8WXS4 190 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 G6PC3Q9BUM1 346 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 DEFB126Q9BYW3 111 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 PLA2G2EQ9NZK7 142 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 ZNF391Q9UJN7 358 aa7.98□□□□□ -1.13
SNHG3-201ENST00000413987 EML6Q6ZMW3 1958 aa7.97□□□□□ -1.13
SNHG3-201ENST00000413987 DOCK10Q96BY6 2186 aa7.97□□□□□ -1.13
SNHG3-201ENST00000413987 H3BSH0 61 aa7.97□□□□□ -1.13
SNHG3-201ENST00000413987 LIFP15018 202 aa7.97□□□□□ -1.13
SNHG3-201ENST00000413987 FGF7P21781 194 aa7.97□□□□□ -1.13
SNHG3-201ENST00000413987 CLDN15P56746 228 aa7.97□□□□□ -1.13
SNHG3-201ENST00000413987 SLC35A1P78382 337 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms