RNA–Protein interactions for RNA: ENST00000412964.6

CCDC138-203, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC138, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-203ENST00000412964 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
CCDC138-203ENST00000412964 TNFRSF13BO14836 293 aaPredicted RBP11.51□□□□□ -0.57
CCDC138-203ENST00000412964 IGHV2-70P01814 119 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 CGB3P0DN86 165 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 CGB7P0DN87 165 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 UCP1P25874 307 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
CCDC138-203ENST00000412964 TMEM200BQ69YZ2 307 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 ZBTB8BQ8NAP8 495 aaPredicted RBP11.51□□□□□ -0.57
CCDC138-203ENST00000412964 RBPMSQ93062 196 aaKnown RBP11.51□□□□□ -0.57
CCDC138-203ENST00000412964 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 MBD2Q9UBB5 411 aa11.51□□□□□ -0.57
CCDC138-203ENST00000412964 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 A1L4Q6 167 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 MMP23AO75900 390 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 CDS2O95674 445 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 ZNF134P52741 427 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 TCTEX1D2Q8WW35 142 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 AGMATQ9BSE5 352 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 TOLLIPQ9H0E2 274 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 SDHAF2Q9NX18 166 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 IDI2-AS1Q9NZ38 188 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 TMED3Q9Y3Q3 217 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 CENPEQ02224 2701 aa11.5□□□□□ -0.57
CCDC138-203ENST00000412964 KCNAB3O43448 404 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 CXCL2P19875 107 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 RAB32Q13637 225 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 SELENOHQ8IZQ5 122 aaKnown RBP11.49□□□□□ -0.57
CCDC138-203ENST00000412964 DCUN1D4Q92564 292 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 TMEM56Q96MV1 263 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 ABHD14AQ9BUJ0 271 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 MFFQ9GZY8 342 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 KLF2Q9Y5W3 355 aaPredicted RBP11.49□□□□□ -0.57
CCDC138-203ENST00000412964 TMEM56-RWDD3S4R434 201 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 SLC31A2O15432 143 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 IFITM2Q01629 132 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 CATR1Q13166 79 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 CORO2AQ92828 525 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 C5orf30Q96GV9 206 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 TAS2R3Q9NYW6 316 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
CCDC138-203ENST00000412964 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
CCDC138-203ENST00000412964 HMSDA8MTL9 139 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 CLDN1O95832 211 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 PET100P0DJ07 73 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 AKR1C2P52895 323 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 LINC00205P59089 165 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 MRPS11P82912 194 aaKnown RBP11.48□□□□□ -0.57
CCDC138-203ENST00000412964 RPL39P5Q59GN2 51 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 OR8B3Q8NGG8 313 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 OR52M1Q8NGK5 317 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 OR8B2Q96RD0 313 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 LSM5Q9Y4Y9 91 aaKnown RBP11.48□□□□□ -0.57
CCDC138-203ENST00000412964 RAMP3O60896 148 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 B3GALNT1O75752 331 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 RPA2P15927 270 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 EPHA1P21709 976 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
CCDC138-203ENST00000412964 THOC7Q6I9Y2 204 aaKnown RBP11.48□□□□□ -0.57
CCDC138-203ENST00000412964 LYG1Q8N1E2 194 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 INO80EQ8NBZ0 244 aaPredicted RBP11.48□□□□□ -0.57
CCDC138-203ENST00000412964 ARL6Q9H0F7 186 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
CCDC138-203ENST00000412964 M0R1X1 148 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 NXPH3O95157 252 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 VDAC1P21796 283 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 RAB7AP51149 207 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 CT45A1Q5HYN5 189 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 CT45A3Q8NHU0 189 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 OR5AC2Q9NZP5 309 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 RPUSD1Q9UJJ7 312 aaKnown RBP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 F12P00748 615 aaPredicted RBP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 GPR6P46095 362 aaPredicted RBP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 EFNA4P52798 201 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 SRSF1Q07955 248 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 SPAG16Q8N0X2 631 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 NEIL1Q96FI4 390 aaPredicted RBP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
CCDC138-203ENST00000412964 MIOXQ9UGB7 285 aa11.47□□□□□ -0.57
CCDC138-203ENST00000412964 LINC00473A8K010 186 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 SLC25A4P12235 298 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 C4BPBP20851 252 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 TMEM33P57088 247 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 HEPN1Q6WQI6 88 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 RRNAD1Q96FB5 475 aaKnown RBP11.46□□□□□ -0.57
CCDC138-203ENST00000412964 CCL19Q99731 98 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 SPIN2AQ99865 258 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 GON7Q9BXV9 100 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 SLA2Q9H6Q3 261 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 TNFSF18Q9UNG2 199 aa11.46□□□□□ -0.57
CCDC138-203ENST00000412964 SAA2-SAA4A0A096LPE2 208 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms