RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PPP1CBP62140 327 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 RPP25LQ8N5L8 163 aaKnown RBP14.06□□□□□ -0.16
LIMS2-208ENST00000410011 WDYHV1Q96HA8 205 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 SLC39A9Q9NUM3 307 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 KCNIP1Q9NZI2 227 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 NAT8Q9UHE5 227 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 TRAV39A0A0B4J263 110 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 NXPH2O95156 264 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 SELEP16581 610 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 FAM209BQ5JX69 171 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 FIP1L1Q6UN15 594 aaKnown RBP14.05□□□□□ -0.16
LIMS2-208ENST00000410011 LINC00696Q6ZRV3 163 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 CYP2G1PQ6ZSU1 146 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 PRR18Q8N4B5 295 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 CDX2Q99626 313 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-208ENST00000410011 PYGO2Q9BRQ0 406 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 RBKSQ9H477 322 aa14.05□□□□□ -0.16
LIMS2-208ENST00000410011 CEBPZOSA8MTT3 80 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 ATXN7O15265 892 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-208ENST00000410011 TRGC1P0CF51 173 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF16P17020 682 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-208ENST00000410011 FGF8P55075 233 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-208ENST00000410011 SPATA46Q5T0L3 261 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 SLC35E4Q6ICL7 350 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 LHX4Q969G2 390 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 GALMQ96C23 342 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 OR51B6Q9H340 312 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 C12orf49Q9H741 205 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 TMEM30CPA0ZSE6 113 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 C3orf80F5H4A9 247 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 CDIPTO14735 213 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 MEF2BQ02080 365 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-208ENST00000410011 C3AR1Q16581 482 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 FRZBQ92765 325 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 BCL2L14Q9BZR8 327 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 OR2J1Q9GZK6 312 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 CDH20Q9HBT6 801 aa14.04□□□□□ -0.16
LIMS2-208ENST00000410011 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-208ENST00000410011 A0A1W2PNU3 283 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-208ENST00000410011 LRRC30A6NM36 301 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 PMS2P5A8MQ11 134 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 ESPL1Q14674 2120 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 FER1L6-AS2Q96M78 137 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 TMEM147Q9BVK8 224 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 CTXND1A0A1B0GTU2 59 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 OOEPA6NGQ2 149 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 KBTBD11O94819 623 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 CLDN1O95832 211 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 HAND1O96004 215 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 SOD3P08294 240 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 CATR1Q13166 79 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 TMEM241Q24JQ0 296 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 VWC2Q2TAL6 325 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 OR2B11Q5JQS5 317 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 GMPPAQ96IJ6 420 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-208ENST00000410011 CIB3Q96Q77 187 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-208ENST00000410011 SMOC1Q9H4F8 434 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF891A8MT65 544 aaPredicted RBP14.02□□□□□ -0.16
LIMS2-208ENST00000410011 IGKV1D-33P01593 117 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 IGKV1-33P01594 117 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 CD46P15529 392 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 HIST1H1BP16401 226 aaKnown RBP14.02□□□□□ -0.16
LIMS2-208ENST00000410011 SPINK2P20155 84 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 MPLP40238 635 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 TGFBR3Q03167 851 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 PRR7Q8TB68 274 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 SRD5A3Q9H8P0 318 aa14.02□□□□□ -0.16
LIMS2-208ENST00000410011 UBE2L5PA0A1B0GUS4 154 aa14.02□□□□□ -0.17
LIMS2-208ENST00000410011 OR5H1A6NKK0 313 aa14.02□□□□□ -0.17
LIMS2-208ENST00000410011 RAB29O14966 203 aa14.02□□□□□ -0.17
LIMS2-208ENST00000410011 PFN1P07737 140 aaKnown RBP14.02□□□□□ -0.17
LIMS2-208ENST00000410011 TGIF2LYQ8IUE0 185 aa14.02□□□□□ -0.17
LIMS2-208ENST00000410011 MANBALQ9NQG1 85 aa14.02□□□□□ -0.17
LIMS2-208ENST00000410011 PITPNC1Q9UKF7 332 aa14.02□□□□□ -0.17
LIMS2-208ENST00000410011 MED12LQ86YW9 2145 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 C12orf77C9JDV5 145 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 MDKP21741 143 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-208ENST00000410011 PSMB3P49720 205 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 IGFBP7Q16270 282 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-208ENST00000410011 OR10A7Q8NGE5 316 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 OR10D4PQ8NGN7 298 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 SMIM7Q9BQ49 75 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 GPR61Q9BZJ8 451 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 TRGV5A0A0B4J1U4 118 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 PSPNO60542 156 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 CLDN14O95500 239 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 LY86O95711 162 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 ELLP55199 621 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-208ENST00000410011 PSG7Q13046 419 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 NCR3LG1Q68D85 454 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 INO80CQ6PI98 192 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-208ENST00000410011 MYPOPQ86VE0 399 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-208ENST00000410011 WDR31Q8NA23 367 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 OR10P1Q8NGE3 313 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 SLC25A40Q8TBP6 338 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 ZDHHC11Q9H8X9 412 aa14.01□□□□□ -0.17
LIMS2-208ENST00000410011 DNAJC13O75165 2243 aa14□□□□□ -0.17
LIMS2-208ENST00000410011 ODAMA1E959 279 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms