RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 USP54Q70EL1 1684 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 ROCK1Q13464 1354 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 N4BP2Q86UW6 1770 aaPredicted RBP3.39□□□□□ -1.87
LSM5-206ENST00000409987 IGHV3-72A0A0B4J1Y9 119 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 IGKV6-21A0A0C4DH24 114 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 NKX2-6A6NCS4 301 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 LGALS9O00182 355 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 ANGPTL7O43827 346 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 HBZP02008 142 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 IL6P05231 212 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 SCGB1C2P0DMR2 95 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 DAD1P61803 113 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 RSU1Q15404 277 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 SFXN4Q6P4A7 337 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 ZNF773Q6PK81 442 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 SHISA6Q6ZSJ9 500 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 VN1R4Q7Z5H5 301 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 NAA40Q86UY6 237 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 ZNF429Q86V71 674 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 SCGB1C1Q8TD33 95 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 EEF1AKMT1Q8WVE0 214 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 TMA16Q96EY4 203 aaKnown RBP3.39□□□□□ -1.87
LSM5-206ENST00000409987 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 FAM210BQ96KR6 192 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 ZSCAN16Q9H4T2 348 aaPredicted RBP3.39□□□□□ -1.87
LSM5-206ENST00000409987 HMG20AQ9NP66 347 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 TMEM216Q9P0N5 145 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 YTHDF2Q9Y5A9 579 aaKnown RBP3.39□□□□□ -1.87
LSM5-206ENST00000409987 PIK3C2AO00443 1686 aa3.39□□□□□ -1.87
LSM5-206ENST00000409987 ZFHX4Q86UP3 3567 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 CPSF1Q10570 1443 aaKnown RBP3.38□□□□□ -1.87
LSM5-206ENST00000409987 WNK3Q9BYP7 1800 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 C5orf42Q9H799 3197 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 LOC102724200A0A096LPH7 203 aaPredicted RBP3.38□□□□□ -1.87
LSM5-206ENST00000409987 IGHV3-64DA0A0J9YX35 117 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 WI2-2373I1.2A0A1W2PRP0 233 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 C9JQL5 133 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 CIAO1O76071 339 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 CNIH1O95406 144 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 ATP5G1P05496 136 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 SOD3P08294 240 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 PSG2P11465 335 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 SLC6A1P30531 599 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 MP68P56378 58 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 SPCS3P61009 180 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 RAB5BP61020 215 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 HPCAP84074 193 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 EDDM3AQ14507 147 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 ELOCQ15369 112 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 SLC9A3R2Q15599 337 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 FAM78AQ5JUQ0 283 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 HIST2H3PS2Q5TEC6 136 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 FAM222AQ5U5X8 452 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 OR6V1Q8N148 313 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 Q8N7P7 452 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 ZNF555Q8NEP9 628 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 OR10X1Q8NGY0 326 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 Q8WTZ3 238 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 OLFM3Q96PB7 478 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 ZNF436Q9C0F3 470 aaPredicted RBP3.38□□□□□ -1.87
LSM5-206ENST00000409987 PRO3102Q9H379 93 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 C12orf10Q9HB07 376 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 OR12D3Q9UGF7 316 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 NEU3Q9UQ49 428 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 ZNF318Q5VUA4 2279 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 MTCL1Q9Y4B5 1905 aaKnown RBP3.38□□□□□ -1.87
LSM5-206ENST00000409987 SLIT3O75094 1523 aa3.38□□□□□ -1.87
LSM5-206ENST00000409987 USP34Q70CQ2 3546 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 XIRP2A4UGR9 3374 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 CFAP54Q96N23 3096 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 A6NDX4 124 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 H0YJW9 148 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 H0YJX3 145 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 TMEM250H0YL14 139 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 PSMD12O00232 456 aaPredicted RBP3.37□□□□□ -1.87
LSM5-206ENST00000409987 BPY2O14599 106 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 PLIN3O60664 434 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 KCNK2O95069 426 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 HAND1O96004 215 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 OR4A8P0C604 315 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 TLX1NBP0CAT3 122 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 ADRB3P13945 408 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 ZNF708P17019 499 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 GADD45AP24522 165 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 IMPA1P29218 277 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 DDTP30046 118 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 REG1BP48304 166 aa3.37□□□□□ -1.87
LSM5-206ENST00000409987 SARNPP82979 210 aaKnown RBP3.37□□□□□ -1.87
LSM5-206ENST00000409987 EMX1Q04741 257 aaPredicted RBP3.37□□□□□ -1.87
LSM5-206ENST00000409987 EBPQ15125 230 aaKnown RBP3.37□□□□□ -1.87
LSM5-206ENST00000409987 HENMT1Q5T8I9 393 aaKnown RBP3.37□□□□□ -1.87
LSM5-206ENST00000409987 N4BP2L1Q5TBK1 243 aaPredicted RBP3.37□□□□□ -1.87
LSM5-206ENST00000409987 IGFL2Q6UWQ7 119 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms