RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 C12orf54Q6X4T0 127 aa17.88■□□□□ 0.45
PTCD3-203ENST00000409783 MOB3BQ86TA1 216 aa17.88■□□□□ 0.45
PTCD3-203ENST00000409783 TGIF2LXQ8IUE1 241 aa17.88■□□□□ 0.45
PTCD3-203ENST00000409783 RBM38Q9H0Z9 239 aaKnown RBP17.88■□□□□ 0.45
PTCD3-203ENST00000409783 RANBP3Q9H6Z4 567 aaPredicted RBP17.88■□□□□ 0.45
PTCD3-203ENST00000409783 IGHV3-72A0A0B4J1Y9 119 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 TXNL1O43396 289 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 HLA-DQB1P01920 261 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 TMEM69Q5SWH9 247 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 MZT2AQ6P582 158 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 GVQW1Q8N7I0 195 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 EDARADDQ8WWZ3 215 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 AP3S1Q92572 193 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 ABHD14BQ96IU4 210 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 RBM14Q96PK6 669 aaKnown RBP17.87■□□□□ 0.45
PTCD3-203ENST00000409783 BEX1Q9HBH7 125 aa17.87■□□□□ 0.45
PTCD3-203ENST00000409783 A0A1B0GUS0 222 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 CLPSL1A2RUU4 121 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 ZNF736B4DX44 427 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-203ENST00000409783 PROP1O75360 226 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 OR2F2O95006 317 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 FAM106CPP0CH98 169 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 CD1BP29016 333 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 C16orf82Q7Z2V1 217 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 HOGA1Q86XE5 327 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 H1FOOQ8IZA3 346 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-203ENST00000409783 OR10J5Q8NHC4 309 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 RBMXL1Q96E39 390 aaKnown RBP17.86■□□□□ 0.45
PTCD3-203ENST00000409783 SLC25A33Q9BSK2 321 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 NPFFR1Q9GZQ6 430 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 ZNF702PQ9H963 129 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 CCDC59Q9P031 241 aaKnown RBP17.86■□□□□ 0.45
PTCD3-203ENST00000409783 PIPOXQ9P0Z9 390 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 ANXA10Q9UJ72 324 aa17.86■□□□□ 0.45
PTCD3-203ENST00000409783 RAB29O14966 203 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 IGKV1D-33P01593 117 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 IGKV1-33P01594 117 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 AMY1AP04745 511 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 AMY2AP04746 511 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 BLCAPP62952 87 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 LSAMPQ13449 338 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 RPL39P5Q59GN2 51 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 FAM71F2Q6NXP2 309 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 Q6ZS46 218 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 Q8N2B8 174 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 Q8N6K4 173 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 NABP2Q9BQ15 211 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 MRPL20Q9BYC9 149 aaKnown RBP17.85■□□□□ 0.45
PTCD3-203ENST00000409783 MIXL1Q9H2W2 232 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 GHITMQ9H3K2 345 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 ANAPC10Q9UM13 185 aa17.85■□□□□ 0.45
PTCD3-203ENST00000409783 LPLP06858 475 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 SOX6P35712 828 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 PROK1P58294 105 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 CNIH2Q6PI25 160 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 BEST4Q8NFU0 473 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 OR4C13Q8NGP0 309 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 SNAPC3Q92966 411 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 EAF1Q96JC9 268 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-203ENST00000409783 RNF150Q9ULK6 438 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 SIGLEC9Q9Y336 463 aa17.84■□□□□ 0.45
PTCD3-203ENST00000409783 NOL3O60936 208 aaKnown RBP17.83■□□□□ 0.44
PTCD3-203ENST00000409783 CTXN2P0C2S0 81 aa17.83■□□□□ 0.44
PTCD3-203ENST00000409783 TMEM11P17152 192 aa17.83■□□□□ 0.44
PTCD3-203ENST00000409783 ZNF747Q9BV97 191 aa17.83■□□□□ 0.44
PTCD3-203ENST00000409783 RNF114Q9Y508 228 aa17.83■□□□□ 0.44
PTCD3-203ENST00000409783 MEIS3P1A6NDR6 274 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 CTDSP2O14595 271 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 OR8U9P0C7N5 309 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 CT45A6P0DMU7 189 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 CT45A5P0DMU8 189 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 CT45A7P0DMV0 189 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 CBX5P45973 191 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 HES1Q14469 280 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 HNF4GQ14541 408 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 C3orf56Q8N813 242 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 OR8U1Q8NH10 309 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 S1PR3Q99500 378 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 GINS4Q9BRT9 223 aa17.82■□□□□ 0.44
PTCD3-203ENST00000409783 SLIRPQ9GZT3 109 aaKnown RBP17.82■□□□□ 0.44
PTCD3-203ENST00000409783 SMIM31A0A1B0GVY4 71 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 PRSS3P35030 304 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 KRTAP10-3P60369 221 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 OR2T10Q8NGZ9 312 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 GPX8Q8TED1 209 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 WFDC12Q8WWY7 111 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 C5orf30Q96GV9 206 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 AKR1E2Q96JD6 320 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 PRSS22Q9GZN4 317 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 PLSCR3Q9NRY6 295 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 SERTAD4Q9NUC0 356 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 GAB2Q9UQC2 676 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 MOB4Q9Y3A3 225 aa17.81■□□□□ 0.44
PTCD3-203ENST00000409783 FAM25AB3EWG3 89 aa17.8■□□□□ 0.44
PTCD3-203ENST00000409783 FAM25CB3EWG5 89 aa17.8■□□□□ 0.44
PTCD3-203ENST00000409783 FAM25GB3EWG6 89 aa17.8■□□□□ 0.44
PTCD3-203ENST00000409783 FCER2P06734 321 aa17.8■□□□□ 0.44
PTCD3-203ENST00000409783 NAT1P18440 290 aa17.8■□□□□ 0.44
PTCD3-203ENST00000409783 C11orf88Q6PI97 169 aa17.8■□□□□ 0.44
PTCD3-203ENST00000409783 LAX1Q8IWV1 398 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms