RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SDHAF2Q9NX18 166 aa10.24□□□□□ -0.77
CHMP3-204ENST00000409727 ZNRD1Q9P1U0 126 aa10.24□□□□□ -0.77
CHMP3-204ENST00000409727 A0A0B4J2A0 478 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 OR2A4O95047 310 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 C1QBP02746 253 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 F2RP25116 425 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 DLX1P56177 255 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 LINC00205P59089 165 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 RAP2BP61225 183 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 RPL39P5Q59GN2 51 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 TMEM268Q5VZI3 342 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 GSG1LQ6UXU4 331 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 LYZL2Q7Z4W2 148 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 GRPEL2Q8TAA5 225 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 MSI2Q96DH6 328 aaKnown RBP10.23□□□□□ -0.77
CHMP3-204ENST00000409727 OR2A7Q96R45 310 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
CHMP3-204ENST00000409727 TMEM222Q9H0R3 208 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 IFI27L2Q9H2X8 130 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 LINC00574Q9H8X3 128 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 PATZ1Q9HBE1 687 aaKnown RBP10.23□□□□□ -0.77
CHMP3-204ENST00000409727 RAB18Q9NP72 206 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 GSKIPQ9P0R6 139 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 SHPKQ9UHJ6 478 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
CHMP3-204ENST00000409727 TRBV23-1A0A0A0MS06 115 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 PPIAL4CA0A0B4J2A2 164 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 PPIAL4GP0DN37 164 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 DNASE1P24855 282 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 ZNF787Q6DD87 383 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 HEPN1Q6WQI6 88 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 ZNF695Q8IW36 515 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 LGI3Q8N145 548 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 LYG1Q8N1E2 194 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 SLC35G3Q8N808 338 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 OR11H4Q8NGC9 324 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 OR10C1Q96KK4 312 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 ONECUT1Q9UBC0 465 aa10.23□□□□□ -0.77
CHMP3-204ENST00000409727 C22orf46C9J442 243 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 G3V3Q6 166 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 H0Y980 276 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 PDLIM4P50479 330 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 DLX6P56179 175 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 RPL30P62888 115 aaKnown RBP10.22□□□□□ -0.77
CHMP3-204ENST00000409727 ESCO2Q56NI9 601 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 GGNBP1Q5YKI7 109 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 HIST2H2BCQ6DN03 193 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 TCTEX1D2Q8WW35 142 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 C18orf12Q96KH6 178 aa10.22□□□□□ -0.77
CHMP3-204ENST00000409727 M0R1X1 148 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 GPR37O15354 613 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 IFNA21P01568 189 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 SERPINE2P07093 398 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 HLA-GP17693 338 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 FAM168AQ92567 244 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 RANBP3Q9H6Z4 567 aaPredicted RBP10.21□□□□□ -0.77
CHMP3-204ENST00000409727 LIN7CQ9NUP9 197 aaKnown RBP10.21□□□□□ -0.77
CHMP3-204ENST00000409727 MALRD1Q5VYJ5 2156 aa10.21□□□□□ -0.77
CHMP3-204ENST00000409727 DOCK11Q5JSL3 2073 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 RNF212BA8MTL3 300 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 RAMP3O60896 148 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 SAA2P0DJI9 122 aaPredicted RBP10.21□□□□□ -0.78
CHMP3-204ENST00000409727 IGHV1-8P0DP01 117 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 UCP1P25874 307 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 GZMKP49863 264 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 RAB7AP51149 207 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 IAH1Q2TAA2 248 aaPredicted RBP10.21□□□□□ -0.78
CHMP3-204ENST00000409727 C1orf229Q6ZS94 237 aaPredicted RBP10.21□□□□□ -0.78
CHMP3-204ENST00000409727 SELENOHQ8IZQ5 122 aaKnown RBP10.21□□□□□ -0.78
CHMP3-204ENST00000409727 ZBTB34Q8NCN2 500 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF439Q8NDP4 499 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 OR52M1Q8NGK5 317 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 PPP1R1CQ8WVI7 109 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 COMMD9Q9P000 198 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 CRYBG3Q68DQ2 2970 aa10.21□□□□□ -0.78
CHMP3-204ENST00000409727 LOC105371242A0A075B767 164 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 LINC00473A8K010 186 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 F5H0A9 414 aaPredicted RBP10.2□□□□□ -0.78
CHMP3-204ENST00000409727 PROP1O75360 226 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 CDS2O95674 445 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 IGHV2-5P01817 119 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 RPA2P15927 270 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 SRPXP78539 464 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 LCN2P80188 198 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF816Q0VGE8 651 aaPredicted RBP10.2□□□□□ -0.78
CHMP3-204ENST00000409727 EIF4EBP1Q13541 118 aaPredicted RBP10.2□□□□□ -0.78
CHMP3-204ENST00000409727 C11orf91Q3C1V1 193 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 TMEM30BQ3MIR4 351 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 CLEC2AQ6UVW9 174 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 C11orf42Q8N5U0 333 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 LRTM2Q8N967 370 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 OR10A7Q8NGE5 316 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 CLDND2Q8NHS1 167 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 RBMXL1Q96E39 390 aaKnown RBP10.2□□□□□ -0.78
CHMP3-204ENST00000409727 HYLS1Q96M11 299 aa10.2□□□□□ -0.78
CHMP3-204ENST00000409727 TMEM56Q96MV1 263 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms