RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 OR51S1Q8NGJ8 323 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 TERB2Q8NHR7 220 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 NANPQ8TBE9 248 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 GSX1Q9H4S2 264 aaPredicted RBP16.64■□□□□ 0.25
VSX1-203ENST00000409285 SCP2D1Q9UJQ7 156 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 GAB2Q9UQC2 676 aa16.64■□□□□ 0.25
VSX1-203ENST00000409285 ANK3Q12955 4377 aaKnown RBP16.63■□□□□ 0.25
VSX1-203ENST00000409285 LINC00854A0A1B0GVQ3 168 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 LYRM1O43325 122 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 IGHV3-7P01780 117 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 ARG1P05089 322 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 IGHV4-38-2P0DP08 117 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 LUMP51884 338 aaPredicted RBP16.63■□□□□ 0.25
VSX1-203ENST00000409285 HERV-K104P61576 105 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 MINOS1Q5TGZ0 78 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 ODF3L1Q8IXM7 274 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.63■□□□□ 0.25
VSX1-203ENST00000409285 OR10X1Q8NGY0 326 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 YAE1D1Q9NRH1 226 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 MCUBQ9NWR8 336 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 PIPOXQ9P0Z9 390 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 MINOS1-NBL1R4GNA1 71 aa16.63■□□□□ 0.25
VSX1-203ENST00000409285 IGKV1D-13A0A0B4J2D9 117 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 OR5H14A6NHG9 310 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 BUB1B-PAK6H3BSN5 160 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 NPFFO15130 113 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 ST8SIA5O15466 376 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 SLC22A5O76082 557 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 OR8U9P0C7N5 309 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 IGKV1-13P0DP09 117 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 BTCP35070 178 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 UCP3P55916 312 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 SURF2Q15527 256 aaPredicted RBP16.62■□□□□ 0.25
VSX1-203ENST00000409285 FAM120AOSQ5T036 256 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 FAM71F2Q6NXP2 309 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 OR8U1Q8NH10 309 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 MRGPRFQ96AM1 343 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 FXYD6Q9H0Q3 95 aa16.62■□□□□ 0.25
VSX1-203ENST00000409285 A0A1W2PPE3 182 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 LY6LH3BQJ8 138 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 RAB29O14966 203 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 IL3RAP26951 378 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 HTR1DP28221 377 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 DEFA1P59665 94 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 DEFA3P59666 94 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 IDO2Q6ZQW0 420 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 C9orf139Q6ZV77 190 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 ZNF645Q8N7E2 425 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 OR13C8Q8NGS7 320 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 ST6GALNAC6Q969X2 333 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 OR2D2Q9H210 308 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 NUP50Q9UKX7 468 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 SAA4P35542 130 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 CEACAM3P40198 252 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 SCGB2B2Q4G0G5 96 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 LPCAT3Q6P1A2 487 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 ZNF833PQ6ZTB9 187 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 PDZD9Q8IXQ8 264 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 LYG1Q8N1E2 194 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 ZNRD1Q9P1U0 126 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 DPM3Q9P2X0 92 aa16.61■□□□□ 0.25
VSX1-203ENST00000409285 SAA2-SAA4A0A096LPE2 208 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 LEUTXA8MZ59 168 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 IGLV2-14P01704 120 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 SAA2P0DJI9 122 aaPredicted RBP16.6■□□□□ 0.25
VSX1-203ENST00000409285 HNF1AP20823 631 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 LGALS4P56470 323 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 FXYD4P59646 89 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 LDLRAD2Q5SZI1 272 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 ABHD14BQ96IU4 210 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 SLC25A21Q9BQT8 299 aaPredicted RBP16.6■□□□□ 0.25
VSX1-203ENST00000409285 ZNF251Q9BRH9 671 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 ZNF221Q9UK13 617 aa16.6■□□□□ 0.25
VSX1-203ENST00000409285 RBM7Q9Y580 266 aaKnown RBP16.6■□□□□ 0.25
VSX1-203ENST00000409285 OOSP1A8MZH6 123 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 TXNL1O43396 289 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 SLC6A1P30531 599 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 GPR12P47775 334 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 RBMS2Q15434 407 aaKnown RBP16.59■□□□□ 0.25
VSX1-203ENST00000409285 MZT2BQ6NZ67 158 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 SLC38A6Q8IZM9 456 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 POC5Q8NA72 575 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 ZBTB34Q8NCN2 500 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 SECTM1Q8WVN6 248 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 MALSU1Q96EH3 234 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 ZNF486Q96H40 463 aaPredicted RBP16.59■□□□□ 0.25
VSX1-203ENST00000409285 AJUBAQ96IF1 538 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 AKR1E2Q96JD6 320 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 RSRP1Q9BUV0 290 aa16.59■□□□□ 0.25
VSX1-203ENST00000409285 GNRHRP30968 328 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 ZNF816Q0VGE8 651 aaPredicted RBP16.58■□□□□ 0.24
VSX1-203ENST00000409285 RGS21Q2M5E4 152 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 PLA1AQ53H76 456 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 BRD3OSQ6XYD6 125 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 BVESQ8NE79 360 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 TOMM40LQ969M1 308 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 S1PR3Q99500 378 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 SLC5A7Q9GZV3 580 aa16.58■□□□□ 0.24
VSX1-203ENST00000409285 SDHAF2Q9NX18 166 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms