RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 OR2H2O95918 312 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 THBDP07204 575 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 LMO1P25800 156 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 CAV2P51636 162 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 RPL23AP62750 156 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 DEFA5Q01523 94 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 PSG7Q13046 419 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 SPATA46Q5T0L3 261 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 SLC35E4Q6ICL7 350 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 WFDC8Q8IUA0 241 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 BATF2Q8N1L9 274 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 OR2C3Q8N628 320 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 LFNGQ8NES3 379 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 LSM10Q969L4 123 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 CYYR1Q96J86 154 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 C1QTNF6Q9BXI9 259 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 SEC11CQ9BY50 192 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 CCL28Q9NRJ3 127 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 SLC25A15Q9Y619 301 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 CHD3Q12873 2000 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 PRR14LQ5THK1 2151 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 OOEPA6NGQ2 149 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 UMAD1C9J7I0 102 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 F8W036 122 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 HSPB6O14558 160 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 KCNAB3O43448 404 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 GOSR1O95249 250 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 GRPP07492 148 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 ZNF154Q13106 437 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 PEA15Q15121 130 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 PXDC1Q5TGL8 231 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 SSX8Q7RTT4 187 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 FAM90A1Q86YD7 464 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 RNASE11Q8TAA1 199 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 PPP1R35Q8TAP8 253 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 RAB40CQ96S21 281 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 TLNRD1Q9H1K6 362 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 HES4Q9HCC6 221 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 NGBQ9NPG2 151 aa10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-203ENST00000407082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 SIRPB1O00241 398 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 CDIPTO14735 213 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 PITX3O75364 302 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 RHBDL1O75783 438 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 SCO1O75880 301 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 DFFBO76075 338 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 TSPAN15O95858 294 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 HAND1O96004 215 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 IGLV1-44P01699 117 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 CELA3BP08861 270 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 SPP1P10451 314 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 RAB2AP61019 212 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 ID3Q02535 119 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 BTN1A1Q13410 526 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 HERPUD1Q15011 391 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 SMIM21Q3B7S5 101 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 Q6ZPA2 131 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 OR52M1Q8NGK5 317 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 OR10Z1Q8NGY1 313 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 GALMQ96C23 342 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 ZNF488Q96MN9 340 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 PBDC1Q9BVG4 233 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 HRH4Q9H3N8 390 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 SMDT1Q9H4I9 107 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 LYRM2Q9NU23 88 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 IL36RNQ9UBH0 155 aa10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 CARHSP1Q9Y2V2 147 aaKnown RBP10.81□□□□□ -0.68
SMARCB1-203ENST00000407082 IGKV1-6A0A0C4DH72 117 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 ADAM20O43506 726 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 LILRA1O75019 489 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 FBXO24O75426 580 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 SCAF4O95104 1147 aaKnown RBP10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 DANCRP0C864 163 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 CAMLGP49069 296 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 ZNF83P51522 516 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 DVL1P1P54792 670 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 SELENOVP59797 346 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 RPS23P62266 143 aaKnown RBP10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 EWSR1Q01844 656 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 CATR1Q13166 79 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 NMSQ5H8A3 153 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 BTNL8Q6UX41 500 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 STX12Q86Y82 276 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 FAM219AQ8IW50 185 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 DMBX1Q8NFW5 382 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 TOLLIPQ9H0E2 274 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 UQCC1Q9NVA1 299 aa10.8□□□□□ -0.68
SMARCB1-203ENST00000407082 IGKV1D-13A0A0B4J2D9 117 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 BTBD17A6NE02 478 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms