RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 HOXA6P31267 233 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 SLC35B1P78383 322 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 TGIF1Q15583 401 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 CYB5R2Q6BCY4 276 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 SPRED2Q7Z698 418 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 ZNF738Q8NE65 137 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 IL19Q9UHD0 177 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 FZR1Q9UM11 496 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-202ENST00000400053 FUT5Q11128 374 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 WDR74Q6RFH5 385 aaPredicted RBP7.73□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM52Q8NDY8 209 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 OR8A1Q8NGG7 326 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 RNF133Q8WVZ7 376 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 DDB2Q92466 427 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 RND1Q92730 232 aa7.73□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM210A6NLX4 147 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 PIN1P1O15428 100 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 CA2P00918 260 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 COMPP49747 757 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 PMCHL1Q16048 86 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 OR4A47Q6IF82 309 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HOGA1Q86XE5 327 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 CDX2Q99626 313 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HSPB9Q9BQS6 159 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 SAP30LQ9HAJ7 183 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 A0A1W2PQD3 144 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 SHISA3A0PJX4 238 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 BCL2P10415 239 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 NXPH1P58417 271 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 FAM3BP58499 235 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 TTC32Q5I0X7 151 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 WDR25Q64LD2 544 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 LAMTOR1Q6IAA8 161 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 AMELYQ99218 206 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 ASCL3Q9NQ33 180 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 DTX4Q9Y2E6 619 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 ZNF236Q9UL36 1845 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 MPDU1O75352 247 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 SRSF10O75494 262 aaKnown RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 PCP4P48539 62 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 ATRAIDQ6UW56 229 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM171Q8WVE6 324 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HIST1H2BAQ96A08 127 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HARBI1Q96MB7 349 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 ABCA1O95477 2261 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 ATRXP46100 2492 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 C17orf51A8MQB3 221 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM50BP56557 158 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM252Q8N6L7 170 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 OR2D3Q8NGH3 330 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 PCGF1Q9BSM1 259 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 PLA2G3Q9NZ20 509 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 AUP1Q9Y679 476 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 LIPT2A6NK58 231 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 C3orf80F5H4A9 247 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HYPMO75409 117 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 GAPDHP04406 335 aaKnown RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HINT1P49773 126 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-202ENST00000400053 DEFB123Q8N688 67 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 OR10J6PQ8NGY7 276 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 HIGD1AQ9Y241 93 aa7.72□□□□□ -1.17
PTPRM-202ENST00000400053 ANK1P16157 1881 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 OTOFQ9HC10 1997 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 GAGE10A6NGK3 116 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.172e-6■■■■□ 22.1
PTPRM-202ENST00000400053 SERF2P84101 59 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 BHLHA15Q7RTS1 189 aaPredicted RBP7.71□□□□□ -1.17
PTPRM-202ENST00000400053 WFIKKN1Q96NZ8 548 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 CLN8Q9UBY8 286 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 GPR132Q9UNW8 380 aa7.71□□□□□ -1.17
PTPRM-202ENST00000400053 DIDO1Q9BTC0 2240 aaKnown RBP7.71□□□□□ -1.17
PTPRM-202ENST00000400053 PDCD11Q14690 1871 aaKnown RBP7.71□□□□□ -1.17
PTPRM-202ENST00000400053 A0A0B4J293 547 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 WNT9BO14905 357 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 DNAL4O96015 105 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 HTN1P15515 57 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 FHITP49789 147 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 P2RY4P51582 365 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 AESQ08117 197 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 ZNF841Q6ZN19 808 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 PTX4Q96A99 478 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 SH3BGRL3Q9H299 93 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 CBLN4Q9NTU7 201 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 RLFQ13129 1914 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 FOXS1O43638 330 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 PLP1P60201 277 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 ANKRD37Q7Z713 158 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 FAM222BQ8WU58 562 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 MARS2Q96GW9 593 aaKnown RBP7.71□□□□□ -1.18
PTPRM-202ENST00000400053 MRPL13Q9BYD1 178 aaKnown RBP7.71□□□□□ -1.18
PTPRM-202ENST00000400053 SYNGR1O43759 233 aa7.71□□□□□ -1.18
PTPRM-202ENST00000400053 PSG2P11465 335 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms