RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 YPEL2Q96QA6 119 aa14.81□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PSMG3Q9BT73 122 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SH3BGRL3Q9H299 93 aa14.81□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PSENENQ9NZ42 101 aa14.81□□□□□ -0.04
HLA-DQB1-204ENST00000399084 HSPB7Q9UBY9 170 aa14.81□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TRAV1-1A0A0B4J248 108 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ODAMA1E959 279 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 FAM90A9PA6NNJ1 464 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 RAB29O14966 203 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 CLDN1O95832 211 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 P0C879 139 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SERF2P84101 59 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ATP6V1FQ16864 119 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 AKR1C8PQ5T2L2 129 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TMEM182Q6ZP80 229 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ZNF561Q8N587 486 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 GCSAMQ8N6F7 178 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SCGB1C1Q8TD33 95 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 RBMXL1Q96E39 390 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 OR2V2Q96R30 315 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SCRT1Q9BWW7 348 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PARP12Q9H0J9 701 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 NDRG3Q9UGV2 375 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 FAM96BQ9Y3D0 163 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 CNOT1A5YKK6 2376 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 IGKV1D-17A0A075B6S4 117 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 F2RL2O00254 374 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ATF4P18848 351 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PTAFRP25105 342 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 UBE2KP61086 200 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TMEM108Q6UXF1 575 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 OR13A1Q8NGR1 328 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 FAM213BQ8TBF2 198 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 Q8TCH9 128 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 EIF5A2Q9GZV4 153 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TMEM231Q9H6L2 316 aa14.8□□□□□ -0.04
HLA-DQB1-204ENST00000399084 RBFOX2O43251 390 aaKnown RBP eCLIP14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 CD40P25942 277 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TNFRSF9Q07011 255 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TMEM217Q8N7C4 229 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 AGMATQ9BSE5 352 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 FAM234AQ9H0X4 552 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SLC35B3Q9H1N7 401 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 KIAA1456Q9P272 454 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 RNF7Q9UBF6 113 aa14.79□□□□□ -0.04
HLA-DQB1-204ENST00000399084 LRRC30A6NM36 301 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 C16orf97H3BN30 126 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 AGPAT2O15120 278 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 GFRA3O60609 400 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PAX6P26367 422 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TDGF1P3P51864 188 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SLC25A24Q6NUK1 477 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 LRP11Q86VZ4 500 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ZNF295-AS1Q8N0V1 137 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 TCTEX1D2Q8WW35 142 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 C14orf79Q96F83 325 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SDSLQ96GA7 329 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 MRPL37Q9BZE1 423 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 HEATR1Q9H583 2144 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 FAM74A7A6NL05 159 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 VSTM5A8MXK1 200 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PPP1CCP36873 323 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 KIR2DS2P43631 304 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 RAB7AP51149 207 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 MSMPQ1L6U9 139 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 FAM74A3Q4VXF1 159 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 SP5Q6BEB4 398 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 DOLPP1Q86YN1 238 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 PINX1Q96BK5 328 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ABHD17AQ96GS6 310 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 ZNF835Q9Y2P0 537 aa14.78□□□□□ -0.04
HLA-DQB1-204ENST00000399084 K7EM74 188 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 PPIHO43447 177 aaKnown RBP14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 EGR1P18146 543 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 ASCL1P50553 236 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 MORN2Q502X0 79 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 TMEM14EPQ6UXP3 125 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 MOGAT3Q86VF5 341 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 RPRMLQ8N4K4 120 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 UBALD1Q8TB05 177 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 METRNQ9UJH8 293 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 TIMM9Q9Y5J7 89 aa14.77□□□□□ -0.05
HLA-DQB1-204ENST00000399084 H7C2Y5 167 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 SSTR5P35346 364 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 LRRC75BQ2VPJ9 315 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 AARDQ4LEZ3 155 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 H2BFWTQ7Z2G1 175 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 TUBA4BQ9H853 241 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 KCNJ16Q9NPI9 418 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 SMCO4Q9NRQ5 59 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 JKAMPQ9P055 326 aa14.76□□□□□ -0.05
HLA-DQB1-204ENST00000399084 ATP6V1G2-DDX39BF2Z307 99 aa14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 NUPL2O15504 423 aaKnown RBP14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 HPRT1P00492 218 aa14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 CGB3P0DN86 165 aa14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 CGB7P0DN87 165 aa14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 GPR12P47775 334 aa14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 ID4P47928 161 aa14.75□□□□□ -0.05
HLA-DQB1-204ENST00000399084 FHITP49789 147 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms