RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SLC25A33Q9BSK2 321 aa16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 C11orf54Q9H0W9 315 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 RANBP3Q9H6Z4 567 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-206ENST00000397408 TRBV6-7A0A0A0MS04 114 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 A0A1B0GUS0 222 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 CLPSL1A2RUU4 121 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 OR2F2O95006 317 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 DIRAS3O95661 229 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 IGKV1D-33P01593 117 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 IGKV1-33P01594 117 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 APOA1P02647 267 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 SOX6P35712 828 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 C16orf82Q7Z2V1 217 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 THNSL2Q86YJ6 484 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 CMTM3Q96MX0 182 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 GINS4Q9BRT9 223 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 C16orf95Q9H693 158 aa16.96■□□□□ 0.3
TSPAN4-206ENST00000397408 ANK2Q01484 3957 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 H3BMQ9 156 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 ZNF833PQ6ZTB9 187 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 ABHD14BQ96IU4 210 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 AKR1E2Q96JD6 320 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 RBM14Q96PK6 669 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 AGMATQ9BSE5 352 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 MRPL20Q9BYC9 149 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 PIPOXQ9P0Z9 390 aa16.95■□□□□ 0.3
TSPAN4-206ENST00000397408 RAB29O14966 203 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 TMEM11P17152 192 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 ELK1P19419 428 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 RPL39P5Q59GN2 51 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 GVQW1Q8N7I0 195 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 TOLLIPQ9H0E2 274 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 SIGLEC9Q9Y336 463 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 RNF114Q9Y508 228 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 CEPT1Q9Y6K0 416 aa16.94■□□□□ 0.3
TSPAN4-206ENST00000397408 ZNF736B4DX44 427 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 CD1BP29016 333 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 LSAMPQ13449 338 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 HNF4GQ14541 408 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 FAM71F2Q6NXP2 309 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 DYNC2LI1Q8TCX1 351 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 S1PR3Q99500 378 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 ZNF702PQ9H963 129 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 CCDC59Q9P031 241 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 ANXA10Q9UJ72 324 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 RNF150Q9ULK6 438 aa16.93■□□□□ 0.3
TSPAN4-206ENST00000397408 SMIM31A0A1B0GVY4 71 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 MEIS3P1A6NDR6 274 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 CCDC160A6NGH7 325 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 FAM25AB3EWG3 89 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 FAM25CB3EWG5 89 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 FAM25GB3EWG6 89 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 CNIH2Q6PI25 160 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 HOGA1Q86XE5 327 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 BEST4Q8NFU0 473 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 OR2T6Q8NHC8 308 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 NABP2Q9BQ15 211 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 ZNF251Q9BRH9 671 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 GHITMQ9H3K2 345 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 MOB4Q9Y3A3 225 aa16.92■□□□□ 0.3
TSPAN4-206ENST00000397408 FCER2P06734 321 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 CTXN2P0C2S0 81 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 CBX5P45973 191 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 GPR12P47775 334 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 BLCAPP62952 87 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 EBI3Q14213 229 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 H1FOOQ8IZA3 346 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 OR2T10Q8NGZ9 312 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 RBMXL1Q96E39 390 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 EAF1Q96JC9 268 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 PRSS22Q9GZN4 317 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 IFT46Q9NQC8 304 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 ZNF221Q9UK13 617 aa16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 MRPS7Q9Y2R9 242 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-206ENST00000397408 OR8U9P0C7N5 309 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 PROK1P58294 105 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 ARPC4P59998 168 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 OR8U1Q8NH10 309 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 WFDC12Q8WWY7 111 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 ZNF747Q9BV97 191 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 OR2D2Q9H210 308 aa16.9■□□□□ 0.3
TSPAN4-206ENST00000397408 HAX1O00165 279 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 RGS5O15539 181 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 MOSP00540 346 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 HLA-DQB1P01920 261 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 PRSS3P35030 304 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 ARSJQ5FYB0 599 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 Q6ZS46 218 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 SNX29P2Q8IUI4 249 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 Q8N2B8 174 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 Q8N6K4 173 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 SNAPC3Q92966 411 aa16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 RBM38Q9H0Z9 239 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 RBM7Q9Y580 266 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-206ENST00000397408 SH2D7A6NKC9 451 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-206ENST00000397408 M0QZK8 103 aa16.88■□□□□ 0.29
TSPAN4-206ENST00000397408 AMY1AP04745 511 aa16.88■□□□□ 0.29
TSPAN4-206ENST00000397408 AMY2AP04746 511 aa16.88■□□□□ 0.29
TSPAN4-206ENST00000397408 NFYAP23511 347 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-206ENST00000397408 ABCA11PQ4W5N1 156 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms