RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 LHFPL4Q7Z7J7 247 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 LYG1Q8N1E2 194 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 ARRDC1Q8N5I2 433 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 BEX2Q9BXY8 128 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 MS4A7Q9GZW8 240 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 IFI27L2Q9H2X8 130 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 MCUBQ9NWR8 336 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 UPK1BO75841 260 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 ZNF735P0CB33 412 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 EPHA1P21709 976 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 IL3RAP26951 378 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 FXYD4P59646 89 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 MINOS1Q5TGZ0 78 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 CREB3L1Q96BA8 519 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 ABHD14BQ96IU4 210 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 MINOS1-NBL1R4GNA1 71 aa19.15■□□□□ 0.66
TSPAN4-203ENST00000397397 IGKV1D-13A0A0B4J2D9 117 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 INAFM1C9JVW0 142 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 IGKV1-13P0DP09 117 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 SCGB2B2Q4G0G5 96 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 LDLRAD2Q5SZI1 272 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 DEDD2Q8WXF8 326 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 AGMATQ9BSE5 352 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 OR2D2Q9H210 308 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 DPM3Q9P2X0 92 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 ZNF221Q9UK13 617 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 CDC42EP3Q9UKI2 254 aa19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 SOX21Q9Y651 276 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 ANK3Q12955 4377 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-203ENST00000397397 LEUTXA8MZ59 168 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 GPR12P47775 334 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 LDLRAD3Q86YD5 345 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 ODF3L1Q8IXM7 274 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 FAM216AQ8WUB2 273 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 SECTM1Q8WVN6 248 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 C17orf50Q8WW18 174 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 MOB3AQ96BX8 217 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 PIPOXQ9P0Z9 390 aa19.13■□□□□ 0.65
TSPAN4-203ENST00000397397 A0A0U1RQK1 487 aa19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 CEACAM3P40198 252 aa19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 BCL6BQ8N143 479 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 OR51S1Q8NGJ8 323 aa19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 C22orf15Q8WYQ4 148 aa19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 TOMM40LQ969M1 308 aa19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 HILPDAQ9Y5L2 63 aa19.12■□□□□ 0.65
TSPAN4-203ENST00000397397 SAA2-SAA4A0A096LPE2 208 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 OR5H14A6NHG9 310 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 CENPXA8MT69 81 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 LY6LH3BQJ8 138 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 RAB29O14966 203 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 SAA2P0DJI9 122 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 TPTE2P1Q5T6R2 138 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 BORCS5Q969J3 196 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 RPEQ96AT9 228 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 AJUBAQ96IF1 538 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 PRRT1Q99946 306 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 SLC5A7Q9GZV3 580 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 FXYD6Q9H0Q3 95 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 GHITMQ9H3K2 345 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 FAM96BQ9Y3D0 163 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 HIVEP2P31629 2446 aa19.11■□□□□ 0.65
TSPAN4-203ENST00000397397 C2CD3Q4AC94 2353 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 IFITM3Q01628 133 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 DIAPH2-AS1Q14236 149 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 SSX2Q16385 188 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 C9orf139Q6ZV77 190 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 LHFPL1Q86WI0 220 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 TERB2Q8NHR7 220 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 ST6GALNAC6Q969X2 333 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 MALSU1Q96EH3 234 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 C7orf50Q9BRJ6 194 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 SCP2D1Q9UJQ7 156 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 NF1P21359 2839 aa19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 SETD2Q9BYW2 2564 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-203ENST00000397397 SONP18583 2426 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 NAP1L6A6NFF2 107 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 HSD17B6O14756 317 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 PLA2G10O15496 165 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 SRD5A1P18405 259 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 REG1BP48304 166 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 ZNF137PP52743 207 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 RPL39P5Q59GN2 51 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 AADACL3Q5VUY0 350 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 C16orf87Q6PH81 154 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 DYNAPQ8N1N2 210 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 ZNF645Q8N7E2 425 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 S1PR3Q99500 378 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 CCL28Q9NRJ3 127 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 SLC2A8Q9NY64 477 aa19.09■□□□□ 0.65
TSPAN4-203ENST00000397397 SLC22A5O76082 557 aa19.08■□□□□ 0.65
TSPAN4-203ENST00000397397 PAX6P26367 422 aa19.08■□□□□ 0.65
TSPAN4-203ENST00000397397 IDO2Q6ZQW0 420 aa19.08■□□□□ 0.65
TSPAN4-203ENST00000397397 ZNF833PQ6ZTB9 187 aa19.08■□□□□ 0.65
TSPAN4-203ENST00000397397 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.08■□□□□ 0.65
TSPAN4-203ENST00000397397 SDHAF2Q9NX18 166 aa19.08■□□□□ 0.65
TSPAN4-203ENST00000397397 SVEP1Q4LDE5 3571 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 LYRM1O43325 122 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 GAPDHP04406 335 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 FBP1P09467 338 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 PGAM2P15259 253 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms