RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PRAF2O60831 178 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 DHFRP00374 187 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 MECP2P51608 486 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 RND3P61587 244 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 BAMBIQ13145 260 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 FAHD2BQ6P2I3 314 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 BVESQ8NE79 360 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 OR11H6Q8NGC7 330 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 FAHD2AQ96GK7 314 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 PCGF1Q9BSM1 259 aa19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 ALX4Q9H161 411 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-202ENST00000397396 TRAV6A0A075B6T7 132 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 TGFAP01135 160 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 SPNP16150 400 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 COX7A1P24310 79 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 GNRHRP30968 328 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 FAM53AQ6NSI3 398 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 FAM71F2Q6NXP2 309 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 TMED4Q7Z7H5 227 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 PNKDQ8N490 385 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 MAPK1IP1LQ8NDC0 245 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 S1PR3Q99500 378 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 C5orf66Q9H5L9 145 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 CCL28Q9NRJ3 127 aa19.24■□□□□ 0.67
TSPAN4-202ENST00000397396 HSD17B6O14756 317 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 IGHV3-7P01780 117 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 HOXB4P17483 251 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 ZNF134P52741 427 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 HLA-DRB5Q30154 266 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 ZNF818PQ6ZRF7 136 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 SLC25A42Q86VD7 318 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 LYG1Q8N1E2 194 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 TBX15Q96SF7 602 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 C7orf69Q9H7B7 122 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 SLC2A9Q9NRM0 540 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 FLVCR2Q9UPI3 526 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 CREBBPQ92793 2442 aa19.23■□□□□ 0.67
TSPAN4-202ENST00000397396 RNF212BA8MTL3 300 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 SLC31A2O15432 143 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 IGLV1-47P01700 117 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 UBE2E1P51965 193 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 ZNF137PP52743 207 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 PIGPP57054 158 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 TMEM128Q5BJH2 165 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 ZNF626Q68DY1 528 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 DRAM1Q8N682 238 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 RTBDNQ9BSG5 229 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 RNF150Q9ULK6 438 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 ABCA2Q9BZC7 2435 aa19.22■□□□□ 0.67
TSPAN4-202ENST00000397396 CCDC168Q8NDH2 2452 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 B3GALNT1O75752 331 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 CEACAM3P40198 252 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 CATR1Q13166 79 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 SGPP2Q8IWX5 399 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 TEX29Q8N6K0 151 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 RTN4IP1Q8WWV3 396 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 ABHD14BQ96IU4 210 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 GPN1Q9HCN4 374 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 CR1P17927 2039 aa19.21■□□□□ 0.67
TSPAN4-202ENST00000397396 PDZD2O15018 2839 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 A0A1W2PPE3 182 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 ODF3BA8MYP8 253 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 TXNL1O43396 289 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 ARG1P05089 322 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 IL5P05113 134 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 ZNF16P17020 682 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 PHLDA2Q53GA4 152 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 ZNF66Q6ZN08 573 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 KCTD9Q7L273 389 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 LDLRAD3Q86YD5 345 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 ADTRPQ96IZ2 230 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 HSD17B10Q99714 261 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 SDHAF2Q9NX18 166 aa19.2■□□□□ 0.66
TSPAN4-202ENST00000397396 ARHGAP32A7KAX9 2087 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 SAA2-SAA4A0A096LPE2 208 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 TEX13DA0A0J9YY54 714 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 RNASEK-C17orf49H0YIS7 233 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 SAA2P0DJI9 122 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 ANXA3P12429 323 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 AKR1C4P17516 323 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 PI3P19957 117 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 ANXA7P20073 488 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 LGALS4P56470 323 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 C4orf46Q504U0 113 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 UTF1Q5T230 341 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 MINOS1Q5TGZ0 78 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 LIN7CQ9NUP9 197 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 KCNIP3Q9Y2W7 256 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 TBL2Q9Y4P3 447 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 MINOS1-NBL1R4GNA1 71 aa19.19■□□□□ 0.66
TSPAN4-202ENST00000397396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.19■□□□□ 0.663e-9■■■□□ 17.3
TSPAN4-202ENST00000397396 MED13LQ71F56 2210 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 CRYM-AS1A6NIL9 109 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 BUB1B-PAK6H3BSN5 160 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 SMAD7O15105 426 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 IGLV2-14P01704 120 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 OR4E1P0C645 316 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 HTR1DP28221 377 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 RAB25P57735 213 aa19.18■□□□□ 0.66
TSPAN4-202ENST00000397396 DHODHQ02127 395 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms