RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 TRBV6-7A0A0A0MS04 114 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 NOL3O60936 208 aaKnown RBP16.73■□□□□ 0.27
SEC13-207ENST00000397105 IGKV1D-33P01593 117 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 IGKV1-33P01594 117 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 CD1BP29016 333 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 TMEM69Q5SWH9 247 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 MZT2AQ6P582 158 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 ODF3L1Q8IXM7 274 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 OR2T6Q8NHC8 308 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 S1PR3Q99500 378 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 CABLES2Q9BTV7 478 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 PRSS22Q9GZN4 317 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 PARP12Q9H0J9 701 aaKnown RBP16.73■□□□□ 0.27
SEC13-207ENST00000397105 RDH8Q9NYR8 311 aa16.73■□□□□ 0.27
SEC13-207ENST00000397105 SAA2-SAA4A0A096LPE2 208 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 M0QZK8 103 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 SSX5O60225 188 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 APOA1P02647 267 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 SAA2P0DJI9 122 aaPredicted RBP16.72■□□□□ 0.27
SEC13-207ENST00000397105 TMEM11P17152 192 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 OR3A3P47888 321 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 HNF4GQ14541 408 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 C11orf88Q6PI97 169 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 ZNF833PQ6ZTB9 187 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 GINS4Q9BRT9 223 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 AGMATQ9BSE5 352 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 TOLLIPQ9H0E2 274 aa16.72■□□□□ 0.27
SEC13-207ENST00000397105 IGKV1D-8A0A087WSZ0 117 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 IGHV3-72A0A0B4J1Y9 119 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 SMIM31A0A1B0GVY4 71 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 CTXN2P0C2S0 81 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 SOX6P35712 828 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 BLCAPP62952 87 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 EBI3Q14213 229 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 SPCS2Q15005 226 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 FBLN7Q53RD9 439 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 FAM71F2Q6NXP2 309 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 SHISA2Q6UWI4 295 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 OR2T10Q8NGZ9 312 aa16.71■□□□□ 0.27
SEC13-207ENST00000397105 HAX1O00165 279 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 EIF4EP06730 217 aaKnown RBP16.7■□□□□ 0.26
SEC13-207ENST00000397105 PROK1P58294 105 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 TAS2R20P59543 309 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 Q8N2B8 174 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 ABHD14BQ96IU4 210 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 EAF1Q96JC9 268 aaPredicted RBP16.7■□□□□ 0.26
SEC13-207ENST00000397105 ZNF702PQ9H963 129 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 ANXA10Q9UJ72 324 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 ZNF221Q9UK13 617 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 RNF150Q9ULK6 438 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 SIGLEC9Q9Y336 463 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 MOB4Q9Y3A3 225 aa16.7■□□□□ 0.26
SEC13-207ENST00000397105 ZNF736B4DX44 427 aaPredicted RBP16.69■□□□□ 0.26
SEC13-207ENST00000397105 MOSP00540 346 aa16.69■□□□□ 0.26
SEC13-207ENST00000397105 CBX5P45973 191 aa16.69■□□□□ 0.26
SEC13-207ENST00000397105 CNIH2Q6PI25 160 aa16.69■□□□□ 0.26
SEC13-207ENST00000397105 WFDC12Q8WWY7 111 aa16.69■□□□□ 0.26
SEC13-207ENST00000397105 MRPL20Q9BYC9 149 aaKnown RBP16.69■□□□□ 0.26
SEC13-207ENST00000397105 HPGDSO60760 199 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 GPR12P47775 334 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 LSAMPQ13449 338 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 RPL39P5Q59GN2 51 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 ARSJQ5FYB0 599 aaPredicted RBP16.68■□□□□ 0.26
SEC13-207ENST00000397105 HOGA1Q86XE5 327 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 NABP2Q9BQ15 211 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 ZNF251Q9BRH9 671 aa16.68■□□□□ 0.26
SEC13-207ENST00000397105 NCBP2LA6PVI3 153 aaKnown RBP16.67■□□□□ 0.26
SEC13-207ENST00000397105 AMY1AP04745 511 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 AMY2AP04746 511 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 OR8U9P0C7N5 309 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 PTHLHP12272 177 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 ELK1P19419 428 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 ABCA11PQ4W5N1 156 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 H1FOOQ8IZA3 346 aaPredicted RBP16.67■□□□□ 0.26
SEC13-207ENST00000397105 BEST4Q8NFU0 473 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 OR8U1Q8NH10 309 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 ISOC1Q96CN7 298 aa16.67■□□□□ 0.26
SEC13-207ENST00000397105 MRPS7Q9Y2R9 242 aaKnown RBP16.67■□□□□ 0.26
SEC13-207ENST00000397105 RBM7Q9Y580 266 aaKnown RBP16.67■□□□□ 0.26
SEC13-207ENST00000397105 FAM25AB3EWG3 89 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 FAM25CB3EWG5 89 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 FAM25GB3EWG6 89 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 FGF16O43320 207 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 PRSS3P35030 304 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 ARPC4P59998 168 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 Q6ZS46 218 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 Q8N6K4 173 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 GVQW1Q8N7I0 195 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.66■□□□□ 0.26
SEC13-207ENST00000397105 OR8H1Q8NGG4 311 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 GAB2Q9UQC2 676 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 CEPT1Q9Y6K0 416 aa16.66■□□□□ 0.26
SEC13-207ENST00000397105 H3BMQ9 156 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 PEX14O75381 377 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 CT45A6P0DMU7 189 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 CT45A5P0DMU8 189 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 CT45A7P0DMV0 189 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 MC5RP33032 325 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 C5orf56Q8N8D9 126 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 DYNC2LI1Q8TCX1 351 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms