RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 Q8N7P7 452 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 LSM10Q969L4 123 aaKnown RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 TMEM45BQ96B21 275 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 PITPNC1Q9UKF7 332 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 GAB2Q9UQC2 676 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 WDR1O75083 606 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 MRPL33O75394 65 aaKnown RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 CA6P23280 308 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 OTX2P32243 289 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 TIPARPQ7Z3E1 657 aaKnown RBP11.74□□□□□ -0.53
NUP98-204ENST00000397004 FAM58AQ8N1B3 248 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 DRAM1Q8N682 238 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 OR1L1Q8NH94 360 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 SMIM7Q9BQ49 75 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 GPR87Q9BY21 358 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 OR51I2Q9H344 312 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 SRD5A3Q9H8P0 318 aa11.74□□□□□ -0.53
NUP98-204ENST00000397004 OPN1MWP04001 364 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 WNT2P09544 360 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 CTXN2P0C2S0 81 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 HOXA6P31267 233 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 CLDN18P56856 261 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 MEF2BQ02080 365 aaPredicted RBP11.73□□□□□ -0.53
NUP98-204ENST00000397004 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 P2RX4Q99571 388 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 PRSS50Q9UI38 385 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 LAMP3Q9UQV4 416 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
NUP98-204ENST00000397004 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 IER2Q9BTL4 223 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 PARLQ9H300 379 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 MED13Q9UHV7 2174 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 C1QTNF9BB2RNN3 333 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 EGR1P18146 543 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 TFF3Q07654 80 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 ALKBH6Q3KRA9 238 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 DNLZQ5SXM8 178 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 LYSMD4Q5XG99 296 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 OR5R1Q8NH85 324 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
NUP98-204ENST00000397004 AURKAIP1Q9NWT8 199 aaPredicted RBP11.73□□□□□ -0.53
NUP98-204ENST00000397004 P0C879 139 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 SERF2P84101 59 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 NUFIP2Q7Z417 695 aaKnown RBP11.72□□□□□ -0.53
NUP98-204ENST00000397004 RNASEH2CQ8TDP1 164 aaKnown RBP11.72□□□□□ -0.53
NUP98-204ENST00000397004 LHX4Q969G2 390 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 CLN8Q9UBY8 286 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 KMT2EQ8IZD2 1858 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 SIRPB1O00241 398 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 NUPR1O60356 82 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 BMP5P22003 454 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 NUBP1P53384 320 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 TMPRSS7Q7RTY8 843 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 APOBEC3DQ96AK3 386 aaPredicted RBP11.72□□□□□ -0.53
NUP98-204ENST00000397004 URB1O60287 2271 aaKnown RBP11.72□□□□□ -0.53
NUP98-204ENST00000397004 NPIPB11E5RHQ5 1161 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 MKRN2OSH3BPM6 223 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 KBTBD11O94819 623 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 NRN1LQ496H8 165 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 COA6Q5JTJ3 125 aaKnown RBP11.72□□□□□ -0.53
NUP98-204ENST00000397004 NCR3LG1Q68D85 454 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 ZNF497Q6ZNH5 498 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 SSX9Q7RTT3 188 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 LILRB2Q8N423 598 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 TMEM105Q8N8V8 129 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 RNF150Q9ULK6 438 aa11.72□□□□□ -0.53
NUP98-204ENST00000397004 NEURL1O76050 574 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 OR2H2O95918 312 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 OR4A8P0C604 315 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 FOLR3P41439 243 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 ACSF3Q4G176 576 aaPredicted RBP11.71□□□□□ -0.53
NUP98-204ENST00000397004 SPINK9Q5DT21 86 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 SLC31A2O15432 143 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 MT-CO3P00414 261 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 TUBG1P23258 451 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
NUP98-204ENST00000397004 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 GCSAMLQ5JQS6 135 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 TMEM9BQ9NQ34 198 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 NAT8Q9UHE5 227 aa11.71□□□□□ -0.53
NUP98-204ENST00000397004 G6PCP35575 357 aa11.71□□□□□ -0.54
NUP98-204ENST00000397004 BSXQ3C1V8 233 aa11.71□□□□□ -0.54
NUP98-204ENST00000397004 MAFAQ8NHW3 353 aaPredicted RBP11.71□□□□□ -0.54
NUP98-204ENST00000397004 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.54
NUP98-204ENST00000397004 DERL1Q9BUN8 251 aa11.71□□□□□ -0.54
NUP98-204ENST00000397004 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 EREGO14944 169 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 PSPNO60542 156 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms