RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CT45A3Q8NHU0 189 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 GALNT14Q96FL9 552 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 SESN1Q9Y6P5 492 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 ARHGAP32A7KAX9 2087 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 C3orf85A0A1B0GTC6 90 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 RBP4P02753 201 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 OR5AC1P0C628 307 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 SULT1A3P0DMM9 295 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 SULT1A4P0DMN0 295 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 LCN2P80188 198 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 MSMO1Q15800 293 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 KCTD9Q7L273 389 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 COQ8AQ8NI60 647 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 IFI27L2Q9H2X8 130 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 PRR13Q9NZ81 148 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 MGAT4CQ9UBM8 478 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 CELSR2Q9HCU4 2923 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 ENSAO43768 121 aaKnown RBP16.73■□□□□ 0.27
VCPKMT-202ENST00000395860 SP6Q3SY56 376 aa16.73■□□□□ 0.27
VCPKMT-202ENST00000395860 Q3ZCU0 254 aa16.73■□□□□ 0.27
VCPKMT-202ENST00000395860 SDHAF2Q9NX18 166 aa16.73■□□□□ 0.27
VCPKMT-202ENST00000395860 SPG11Q96JI7 2443 aa16.73■□□□□ 0.27
VCPKMT-202ENST00000395860 TACC2O95359 2948 aa16.73■□□□□ 0.27
VCPKMT-202ENST00000395860 A8MV72 311 aaPredicted RBP16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 FOXH1O75593 365 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 SLC25A16P16260 332 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 CXCL3P19876 107 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 CD83Q01151 205 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 ANKRD55Q3KP44 614 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 SLC25A48Q6ZT89 311 aaKnown RBP16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 OR51H1Q8NH63 302 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 C5orf30Q96GV9 206 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 TP53RKQ96S44 253 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 TMEM133Q9H2Q1 129 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A087X0M5 115 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A0B4J2A0 478 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A1B0GX30 115 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 GOSR2O14653 212 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 F2RP25116 425 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 ARF6P62330 175 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 TMEM187Q14656 261 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 BTNL3Q6UXE8 466 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 LYG1Q8N1E2 194 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 DMRTB1Q96MA1 342 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 SHPKQ9UHJ6 478 aa16.72■□□□□ 0.27
VCPKMT-202ENST00000395860 RNF212BA8MTL3 300 aa16.71■□□□□ 0.27
VCPKMT-202ENST00000395860 M0R1W7 72 aa16.71■□□□□ 0.27
VCPKMT-202ENST00000395860 CD300CQ08708 224 aa16.71■□□□□ 0.27
VCPKMT-202ENST00000395860 MBD6Q96DN6 1003 aa16.71■□□□□ 0.27
VCPKMT-202ENST00000395860 PIPOXQ9P0Z9 390 aa16.71■□□□□ 0.27
VCPKMT-202ENST00000395860 GCN1Q92616 2671 aaKnown RBP16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 ANKRD17O75179 2603 aaKnown RBP16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 FAM157AC9JC47 383 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 RAB29O14966 203 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF16P17020 682 aaPredicted RBP16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 C2orf68Q2NKX9 166 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 ABHD12Q8N2K0 398 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 OR9G1Q8NH87 305 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 GLYATL2Q8WU03 294 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 GAB2Q9UQC2 676 aa16.7■□□□□ 0.26
VCPKMT-202ENST00000395860 IGHV2-70DA0A0C4DH43 119 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 H0Y980 276 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 J3QR06 171 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 CATR1Q13166 79 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 RPL39P5Q59GN2 51 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 LIAT1Q6ZQX7 453 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 KIR3DL3Q8N743 410 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 Q8N7P7 452 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 C8orf31Q8N9H6 132 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 ST6GAL2Q96JF0 529 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 HSD17B10Q99714 261 aaKnown RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 TMEM222Q9H0R3 208 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 RANGRFQ9HD47 186 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 LIN7CQ9NUP9 197 aaKnown RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 SAA2-SAA4A0A096LPE2 208 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 DBX1A6NMT0 343 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 B3GALNT1O75752 331 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 SAA2P0DJI9 122 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 DLX1P56177 255 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 PAX2Q02962 417 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 EIF4EBP1Q13541 118 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF66Q6ZN08 573 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 ODF3L1Q8IXM7 274 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 MSI2Q96DH6 328 aaKnown RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNF436Q9C0F3 470 aaPredicted RBP16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 ZNRD1Q9P1U0 126 aa16.69■□□□□ 0.26
VCPKMT-202ENST00000395860 M0R1X1 148 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 TOR1AO14656 332 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 USF1P22415 310 aaPredicted RBP16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 SRPXP78539 464 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 LGI3Q8N145 548 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 LINC00311Q8N616 119 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 OR10X1Q8NGY0 326 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 CLEC7AQ9BXN2 247 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 METTL8Q9H825 291 aaKnown RBP16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 LPAR2Q9HBW0 351 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 MMP26Q9NRE1 261 aa16.68■□□□□ 0.26
VCPKMT-202ENST00000395860 IGHV2-26A0A0B4J1V2 119 aa16.67■□□□□ 0.26
VCPKMT-202ENST00000395860 CCSO14618 274 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms