RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 YPEL1O60688 119 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 GSTT2P0CG29 244 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 GSTT2BP0CG30 244 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 CD40LGP29965 261 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 REG1BP48304 166 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 PPP5CP53041 499 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 ZNF846Q147U1 533 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 HERPUD1Q15011 391 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 PYDC2Q56P42 97 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 AWAT1Q58HT5 328 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 DHRS7BQ6IAN0 325 aaPredicted RBP13.29□□□□□ -0.28
CXCL1-201ENST00000395761 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 ST6GALNAC6Q969X2 333 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 SDHCQ99643 169 aaPredicted RBP13.29□□□□□ -0.28
CXCL1-201ENST00000395761 PARP12Q9H0J9 701 aaKnown RBP13.29□□□□□ -0.28
CXCL1-201ENST00000395761 RBMX2Q9Y388 322 aaKnown RBP13.29□□□□□ -0.28
CXCL1-201ENST00000395761 A0A1W2PPI3 338 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 HSD17B6O14756 317 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 TIMM23O14925 209 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 RBBP9O75884 186 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 MDKP21741 143 aaPredicted RBP13.28□□□□□ -0.28
CXCL1-201ENST00000395761 BRS3P32247 399 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 CEACAM6P40199 344 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 COMPP49747 757 aaPredicted RBP13.28□□□□□ -0.28
CXCL1-201ENST00000395761 RPL15P61313 204 aaKnown RBP13.28□□□□□ -0.28
CXCL1-201ENST00000395761 DGCR2P98153 550 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 LY6G6FQ5SQ64 297 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 STEAP3Q658P3 488 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 CCDC144NLQ6NUI1 221 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 Q6ZSV7 163 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 Q8N402 240 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 DRAM1Q8N682 238 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 TSC22D3Q99576 134 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 ABHD14AQ9BUJ0 271 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 SLC23A1Q9UHI7 598 aa13.28□□□□□ -0.28
CXCL1-201ENST00000395761 ZNF107Q9UII5 783 aaPredicted RBP13.28□□□□□ -0.28
CXCL1-201ENST00000395761 DNHD1Q96M86 4753 aa13.27□□□□□ -0.28
CXCL1-201ENST00000395761 ST8SIA5O15466 376 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 FABP7O15540 132 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 RGS11O94810 467 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 NDUFA7O95182 113 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 GAPDHP04406 335 aaKnown RBP13.27□□□□□ -0.29
CXCL1-201ENST00000395761 RAB7AP51149 207 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 RAG2P55895 527 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 ZNF816Q0VGE8 651 aaPredicted RBP13.27□□□□□ -0.29
CXCL1-201ENST00000395761 FOXL1Q12952 345 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 IGSF11Q5DX21 431 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 C12orf54Q6X4T0 127 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 ODF3L1Q8IXM7 274 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 GVQW1Q8N7I0 195 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 OR56B4Q8NH76 319 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 CFHR4Q92496 578 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.29
CXCL1-201ENST00000395761 THAP7Q9BT49 309 aaPredicted RBP13.27□□□□□ -0.29
CXCL1-201ENST00000395761 ST6GALNAC5Q9BVH7 336 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 KLK11Q9UBX7 282 aa13.27□□□□□ -0.29
CXCL1-201ENST00000395761 IGHV1-3A0A0C4DH29 117 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 FAM90A9PA6NNJ1 464 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 HSPA12AO43301 675 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 ZBTB25P24278 435 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 IL3RAP26951 378 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 RCVRNP35243 200 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 KIR2DS4P43632 304 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 OR3A3P47888 321 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 ZNF137PP52743 207 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 ACTBP60709 375 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 KIR2DS1Q14954 304 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 LIAT1Q6ZQX7 453 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 MOB3BQ86TA1 216 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 LYSMD2Q8IV50 215 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 BEST4Q8NFU0 473 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 OR2AK2Q8NG84 335 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 CAPSLQ8WWF8 208 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 RTN4IP1Q8WWV3 396 aaPredicted RBP13.26□□□□□ -0.29
CXCL1-201ENST00000395761 CCDC32Q9BV29 185 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 C11orf54Q9H0W9 315 aaPredicted RBP13.26□□□□□ -0.29
CXCL1-201ENST00000395761 IFI27L2Q9H2X8 130 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 IFT46Q9NQC8 304 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 TAS2R8Q9NYW2 309 aa13.26□□□□□ -0.29
CXCL1-201ENST00000395761 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 BET1O15155 118 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 LANCL1O43813 399 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 DIRAS3O95661 229 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 SNRNP70P08621 437 aaKnown RBP13.25□□□□□ -0.29
CXCL1-201ENST00000395761 BAK1Q16611 211 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 OR8H3Q8N146 312 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 OR4F5Q8NH21 305 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 LINC01006Q8NI28 216 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 SNAPC3Q92966 411 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 TRIM63Q969Q1 353 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 RAB18Q9NP72 206 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 PITPNC1Q9UKF7 332 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 RNF150Q9ULK6 438 aa13.25□□□□□ -0.29
CXCL1-201ENST00000395761 MEIS3P1A6NDR6 274 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms