RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 NDNFQ8TB73 568 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 Q96MT0 163 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 BIRC8Q96P09 236 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 SIRT7Q9NRC8 400 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 CFL2Q9Y281 166 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 PLCE1Q9P212 2302 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 CADP27708 2225 aa3.38□□□□□ -1.87
CDKN3-203ENST00000395577 CHD3Q12873 2000 aaKnown RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 TRAV8-7A0A075B6U6 113 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 TRAV8-4A0A0B4J246 113 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 TVP23AA6NH52 213 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 DEFB108AA8MXU0 73 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 APOC4-APOC2K7ER74 178 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 PSIP1O75475 530 aaKnown RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 VAPBO95292 243 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 P01737 135 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 APOC2P02655 101 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 MUC1P15941 1255 aaPredicted RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 IL1RNP18510 177 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 RPS3P23396 243 aaKnown RBP eCLIP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 GALR1P47211 349 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 DYNLT1P63172 113 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 PRDX1Q06830 199 aaKnown RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 EIF4EBP1Q13541 118 aaPredicted RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 ABCA11PQ4W5N1 156 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 EPGNQ6UW88 154 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 CYHR1Q6ZMK1 362 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 BHLHA15Q7RTS1 189 aaPredicted RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 RPS19BP1Q86WX3 136 aaKnown RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 ST13P4Q8IZP2 240 aaPredicted RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 KRT222Q8N1A0 295 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 SYS1Q8N2H4 156 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 ENKURQ8TC29 256 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 ACTL9Q8TC94 416 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 SLC25A46Q96AG3 418 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 DCUN1D1Q96GG9 259 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 NAPGQ99747 312 aaPredicted RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 RNF5Q99942 180 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 PRRG3Q9BZD7 231 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 DRC3Q9H069 523 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 SYT4Q9H2B2 425 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 GOLPH3Q9H4A6 298 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 NECAP2Q9NVZ3 263 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 OPN4Q9UHM6 478 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 VAX2Q9UIW0 290 aa3.37□□□□□ -1.87
CDKN3-203ENST00000395577 RBMX2Q9Y388 322 aaKnown RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 NUP214P35658 2090 aaPredicted RBP3.37□□□□□ -1.87
CDKN3-203ENST00000395577 RAB19A4D1S5 217 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 K7EN84 100 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 PLIN3O60664 434 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 CD74P04233 296 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 BGNP21810 368 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 MSNP26038 577 aaKnown RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 IMPA1P29218 277 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 COILP38432 576 aaPredicted RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 TEX30Q5JUR7 227 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 C16orf47Q6ZP98 133 aaPredicted RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 TMEM251Q8N6I4 163 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 CYB561A3Q8NBI2 242 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 NECAP1Q8NC96 275 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 OR2M7Q8NG81 312 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 OR8K1Q8NGG5 319 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 OR51Q1Q8NH59 317 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 OR1L1Q8NH94 360 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 RNASE6Q93091 150 aaKnown RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 RAD51AP1Q96B01 352 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 RMND5BQ96G75 393 aaPredicted RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 DOK1Q99704 481 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 TTTY12Q9BZ98 90 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 FBXO6Q9NRD1 293 aaPredicted RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 ZNF229Q9UJW7 825 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 KLF13Q9Y2Y9 288 aaPredicted RBP3.36□□□□□ -1.87
CDKN3-203ENST00000395577 LRRC42Q9Y546 428 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 SLC22A7Q9Y694 548 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 NCKAP5O14513 1909 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 CR1P17927 2039 aa3.36□□□□□ -1.87
CDKN3-203ENST00000395577 ALPK2Q86TB3 2170 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 ZNF879B4DU55 563 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 J3QT63 122 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 GATCO43716 136 aaKnown RBP3.35□□□□□ -1.87
CDKN3-203ENST00000395577 SC5DO75845 299 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 GATBO75879 557 aaKnown RBP3.35□□□□□ -1.87
CDKN3-203ENST00000395577 APOA1P02647 267 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 STATHP02808 62 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 MMP7P09237 267 aaPredicted RBP3.35□□□□□ -1.87
CDKN3-203ENST00000395577 OR5AL1P0C617 328 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 LINC00315P59091 139 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 BTG2P78543 158 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 PITPNAQ00169 270 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 DYNC1I2Q13409 638 aaKnown RBP3.35□□□□□ -1.87
CDKN3-203ENST00000395577 POU6F1Q14863 301 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 ACSBG2Q5FVE4 666 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 RBM45Q8IUH3 476 aaKnown RBP3.35□□□□□ -1.87
CDKN3-203ENST00000395577 LRRC25Q8N386 305 aaPredicted RBP3.35□□□□□ -1.87
CDKN3-203ENST00000395577 SPERTQ8NA61 448 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 OR5T1Q8NG75 326 aa3.35□□□□□ -1.87
CDKN3-203ENST00000395577 OR9A2Q8NGT5 310 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms