RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 HBG2P69892 147 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 KIR2DS1Q14954 304 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 PCOLCEQ15113 449 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 OR8B8Q15620 311 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 LYSMD4Q5XG99 296 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 WDR74Q6RFH5 385 aaPredicted RBP12.15□□□□□ -0.47
CLIP2-203ENST00000395060 TMEM18Q96B42 140 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 IMMP2LQ96T52 175 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 ZNF503-AS2A6NEH8 195 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 RAMP3O60896 148 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 MPLP40238 635 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 CEBPDP49716 269 aaPredicted RBP12.14□□□□□ -0.47
CLIP2-203ENST00000395060 RAC1P63000 192 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 RPS19BP1Q86WX3 136 aaKnown RBP12.14□□□□□ -0.47
CLIP2-203ENST00000395060 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 OR10G9Q8NGN4 311 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 OR10G7Q8NGN6 311 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 RNF138Q8WVD3 245 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 NEU1Q99519 415 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 GPR35Q9HC97 309 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 CCL4P13236 92 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 THBS3P49746 956 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
CLIP2-203ENST00000395060 LPAL2Q16609 132 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 LRRC75BQ2VPJ9 315 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 RAB24Q969Q5 203 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 FKBP11Q9NYL4 201 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 TRAPPC2LQ9UL33 140 aa12.14□□□□□ -0.47
CLIP2-203ENST00000395060 MED12LQ86YW9 2145 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 MKRN2OSH3BPM6 223 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 KBTBD11O94819 623 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 COX5BP10606 129 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 GCH1P30793 250 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 FGF12P61328 243 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 FOXO1Q12778 655 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 TCEAL6Q6IPX3 200 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 PATZ1Q9HBE1 687 aaKnown RBP12.13□□□□□ -0.47
CLIP2-203ENST00000395060 TRAV38-1A0A0B4J264 116 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 SPINK4O60575 86 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 CA6P23280 308 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 LTC4SQ16873 150 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 FOXL2NBQ6ZUU3 175 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 MAFAQ8NHW3 353 aaPredicted RBP12.13□□□□□ -0.47
CLIP2-203ENST00000395060 COL5A1P20908 1838 aaPredicted RBP12.13□□□□□ -0.47
CLIP2-203ENST00000395060 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 DKK1O94907 266 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 HRASP01112 189 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 OTX2P32243 289 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 CLDN15P56746 228 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 RAC3P60763 192 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 NOL4LQ96MY1 436 aaPredicted RBP12.13□□□□□ -0.47
CLIP2-203ENST00000395060 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 TRAPPC1Q9Y5R8 145 aa12.13□□□□□ -0.47
CLIP2-203ENST00000395060 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 GDF1P27539 372 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 ATP5G3P48201 142 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 ZNF324BQ6AW86 544 aaPredicted RBP12.12□□□□□ -0.47
CLIP2-203ENST00000395060 TOMM20LQ6UXN7 152 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 MBD3L1Q8WWY6 194 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 TBX15Q96SF7 602 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 PCED1AQ9H1Q7 454 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 TMEM242Q9NWH2 141 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 ZNF716A6NP11 495 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
CLIP2-203ENST00000395060 CEACAM6P40199 344 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 C3AR1Q16581 482 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 FGFRL1Q8N441 504 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 MS4A10Q96PG2 267 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 ACTR3CQ9C0K3 210 aaPredicted RBP12.12□□□□□ -0.47
CLIP2-203ENST00000395060 CTDSP1Q9GZU7 261 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 TCFL5Q9UL49 500 aa12.12□□□□□ -0.47
CLIP2-203ENST00000395060 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
CLIP2-203ENST00000395060 B4E171 279 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 NDUFB4O95168 129 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 IL3RAP26951 378 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 TSPAN7P41732 249 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 CNN1P51911 297 aaKnown RBP12.11□□□□□ -0.47
CLIP2-203ENST00000395060 EDDM3BP56851 147 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 ZNF585BQ52M93 769 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 Q6ZSR3 168 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
CLIP2-203ENST00000395060 FAM234AQ9H0X4 552 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 PPIAL4AQ9Y536 164 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 C11orf94C9JXX5 98 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 ZG16O60844 167 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
CLIP2-203ENST00000395060 UMODP07911 640 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 NPPCP23582 126 aa12.11□□□□□ -0.47
CLIP2-203ENST00000395060 TFPI2P48307 235 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms