RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
SMARCD1-202ENST00000394963 TRGV10A0A0A0MS01 117 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 TUBG1P23258 451 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 ATRAIDQ6UW56 229 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 TMEM252Q8N6L7 170 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 EGLN1Q9GZT9 426 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 GPR137BO60478 399 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 S1PR2O95136 353 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 ZNF266Q14584 549 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 KRTCAP3Q53RY4 240 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 TIMM23BQ5SRD1 257 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 SEM1Q6ZVN7 128 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 ABHD5Q8WTS1 349 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 S1PR3Q99500 378 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 NDRG3Q9UGV2 375 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 PCSK5Q92824 1860 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 OOEPA6NGQ2 149 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 H2AFB1P0C5Y9 115 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 COX7A1P24310 79 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 IL13RA2Q14627 380 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 TBR1Q16650 682 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 GUCA2BQ16661 112 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 Q6ZPA2 131 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 CBLN2Q8IUK8 224 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 PINX1Q96BK5 328 aaKnown RBP13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 PIGMQ9H3S5 423 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 RNF7Q9UBF6 113 aa13.37□□□□□ -0.27
SMARCD1-202ENST00000394963 ODAMA1E959 279 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 CD37P11049 281 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 MSI2Q96DH6 328 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 IL36GQ9NZH8 169 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 PRELID3BQ9Y3B1 194 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 A0A0G2JRQ6 117 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 SYNGR2O43760 224 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 ACTL6BO94805 426 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 SAV1Q9H4B6 383 aaPredicted RBP13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 SLC25A15Q9Y619 301 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 C17orf98A8MV24 154 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 RPS2P15880 293 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 ATP6V0CP27449 155 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 NHLH1Q02575 133 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 OR10X1Q8NGY0 326 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
SMARCD1-202ENST00000394963 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 A8MXE2 369 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 NAPSAO96009 420 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 C2CD4CQ8TF44 421 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 PLGLAQ15195 96 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 DEFA4P12838 97 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 KIAA0141Q14154 515 aaPredicted RBP13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 MYOZ1Q9NP98 299 aaPredicted RBP13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 LPAR3Q9UBY5 353 aa13.35□□□□□ -0.27
SMARCD1-202ENST00000394963 A0A0U1RQK1 487 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 IGKV3-15P01624 115 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 DHODHQ02127 395 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 ISOC2Q96AB3 205 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 GP6Q9HCN6 339 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 TNFRSF1AP19438 455 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 GLRXP35754 106 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 RAB11AP62491 216 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 RPL31P62899 125 aaKnown RBP13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 ZNF345Q14585 488 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 RTP5Q14D33 572 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 MSMPQ1L6U9 139 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 SONP18583 2426 aaKnown RBP13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 TUBAL3A6NHL2 446 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 TMEM210A6NLX4 147 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 RNASEK-C17orf49H0YIS7 233 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 CD55P08174 381 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 CCL3L1P16619 93 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 MDH2P40926 338 aaKnown RBP13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 GNB1P62873 340 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 SAXO1Q8IYX7 474 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 CD177Q8N6Q3 437 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 LPAR2Q9HBW0 351 aa13.34□□□□□ -0.27
SMARCD1-202ENST00000394963 TAAR5O14804 337 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 FBP1P09467 338 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 SFTA3P0C7M3 94 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 SNCAP37840 140 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 NBL1P41271 181 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 TRAF4Q9BUZ4 470 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 NKX6-2Q9C056 277 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 C19orf12Q9NSK7 152 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 CISD1Q9NZ45 108 aaKnown RBP13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 POMT1Q9Y6A1 747 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 NKX6-3A6NJ46 265 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 SHOXO15266 292 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 MUC1P15941 1255 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 HBG1P69891 147 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 HBG2P69892 147 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 CST9LP1Q5W188 147 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 RSRP1Q9BUV0 290 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 SLC25A22Q9H936 323 aa13.33□□□□□ -0.28
SMARCD1-202ENST00000394963 GRNP28799 593 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms