RNA–Protein interactions for RNA: ENST00000394943.7

LIMA1-202, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-202ENST00000394943 FABP12A6NFH5 140 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 INAFM1C9JVW0 142 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 IGLV2-23P01705 113 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 UBE2MP61081 183 aaKnown RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SCN1BQ07699 218 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 KLRD1Q13241 179 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 ASAH1Q13510 395 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 LPCAT3Q6P1A2 487 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 PDPNQ86YL7 162 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 RNF152Q8N8N0 203 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 OR10J5Q8NHC4 309 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 DIRAS2Q96HU8 199 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 JMJD8Q96S16 334 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SAA2-SAA4A0A096LPE2 208 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 INS-IGF2F8WCM5 200 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 H0YJW9 148 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 OR2F2O95006 317 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 PPYP01298 95 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 GAPDHP04406 335 aaKnown RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 FBP1P09467 338 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SAA2P0DJI9 122 aaPredicted RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 DUTP33316 252 aaKnown RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SLC9A3R2Q15599 337 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 DEFB112Q30KQ8 113 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 FAHD2BQ6P2I3 314 aaPredicted RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 PUSL1Q8N0Z8 303 aaKnown RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 LRTM2Q8N967 370 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 OR10V1Q8NGI7 309 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 OR13C8Q8NGS7 320 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 FAHD2AQ96GK7 314 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 THAP7Q9BT49 309 aaPredicted RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SDHAF2Q9NX18 166 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 GPR132Q9UNW8 380 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 NAV2Q8IVL1 2488 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 MALRD1Q5VYJ5 2156 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 ARG1P05089 322 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 AKAIN1P0CW23 69 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 GNRHRP30968 328 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 MC5RP33032 325 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 S100A5P33763 92 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 THBS3P49746 956 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 RAG2P55895 527 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 GMFBP60983 142 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 UBA52P62987 128 aaKnown RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 CFHR3Q02985 330 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 MADCAM1Q13477 382 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 ZNF846Q147U1 533 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SLC38A6Q8IZM9 456 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 FAM71E2Q8N5Q1 922 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 SSMEM1Q8WWF3 244 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 GALNT14Q96FL9 552 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 HSD17B10Q99714 261 aaKnown RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 KLK11Q9UBX7 282 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 ZNF230Q9UIE0 474 aaPredicted RBP5.62□□□□□ -1.51
LIMA1-202ENST00000394943 VPREB3Q9UKI3 123 aa5.62□□□□□ -1.51
LIMA1-202ENST00000394943 IGKV1D-13A0A0B4J2D9 117 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 HSD17B6O14756 317 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 CTSDP07339 412 aaPredicted RBP5.61□□□□□ -1.51
LIMA1-202ENST00000394943 IGKV1-13P0DP09 117 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 SRD5A1P18405 259 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 CEACAM6P40199 344 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 RFX2P48378 723 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 AP3S2P59780 193 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 BCL6BQ8N143 479 aaPredicted RBP5.61□□□□□ -1.51
LIMA1-202ENST00000394943 DTX3Q8N9I9 347 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 DUSP18Q8NEJ0 188 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 OR4A5Q8NH83 315 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 ZFAND1Q8TCF1 268 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 IL22RA2Q969J5 263 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 PARP12Q9H0J9 701 aaKnown RBP5.61□□□□□ -1.51
LIMA1-202ENST00000394943 ZNF221Q9UK13 617 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 PLA2G10O15496 165 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 VENTXO95231 258 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 AMY1AP04745 511 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 AMY2AP04746 511 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 OR5H8P0DN80 308 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 BAK1Q16611 211 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 STEAP1BQ6NZ63 245 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 C11orf88Q6PI97 169 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 CCBE1Q6UXH8 406 aaPredicted RBP5.61□□□□□ -1.51
LIMA1-202ENST00000394943 PRIMA1Q86XR5 153 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 CCDC107Q8WV48 283 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 WFDC12Q8WWY7 111 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 WNT10AQ9GZT5 417 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 HRASLSQ9HDD0 168 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 OR2S2Q9NQN1 319 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 M0QZK8 103 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 HSPB6O14558 160 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 AADACP22760 399 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 PPP1CCP36873 323 aaKnown RBP5.61□□□□□ -1.51
LIMA1-202ENST00000394943 LUMP51884 338 aaPredicted RBP5.61□□□□□ -1.51
LIMA1-202ENST00000394943 ARFRP1Q13795 201 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 C5orf24Q7Z6I8 188 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 LHFPL4Q7Z7J7 247 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 C17orf50Q8WW18 174 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 PHF21AQ96BD5 680 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 ABHD14BQ96IU4 210 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 SLC6A7Q99884 636 aa5.61□□□□□ -1.51
LIMA1-202ENST00000394943 RTBDNQ9BSG5 229 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms