RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 C3orf36Q3SXR2 165 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 TIMM23BQ5SRD1 257 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 FGFRL1Q8N441 504 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 SEBOXQ9HB31 216 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 FAM90A26D6RGX4 464 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 CFHR2P36980 270 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 COL10A1Q03692 680 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 SPSB3Q6PJ21 355 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 ZNF474Q6S9Z5 364 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 ZNF561Q8N587 486 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 MMP24Q9Y5R2 645 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 BTBD17A6NE02 478 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 PPP1CCP36873 323 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 GABRA2P47869 451 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 OR52L2PQ8NGH6 319 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 HIST1H2BAQ96A08 127 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 C14orf79Q96F83 325 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 ABHD14AQ9BUJ0 271 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 GSN-AS1Q9NRJ2 163 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 WASF3Q9UPY6 502 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 HEATR1Q9H583 2144 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 S100A6P06703 90 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 TIMP3P35625 211 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 MSMPQ1L6U9 139 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
UBE2D3-207ENST00000394801 SRRM5B3KS81 715 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 IGHV3-13P01766 116 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 P0C879 139 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 AGAP20933 346 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 GLIPR1P48060 266 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 CD177Q8N6Q3 437 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 TCTEX1D1Q8N7M0 179 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 PRSS33Q8NF86 280 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 MRGPRDQ8TDS7 321 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 SLC35B3Q9H1N7 401 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 TUBA4BQ9H853 241 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 SVILO95425 2214 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 CACNA1DQ01668 2161 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 MED19A0JLT2 244 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 H3BP45 60 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 ZNF737O75373 536 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 PRDX2P32119 198 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 RPL30P62888 115 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 RUNX1Q01196 453 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 C1orf185Q5T7R7 199 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 TRAT1Q6PIZ9 186 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 SLC16A13Q7RTY0 426 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 RBMXL3Q8N7X1 1067 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 NINJ1Q92982 152 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 CLCC1Q96S66 551 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 PSENENQ9NZ42 101 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 METTL1Q9UBP6 276 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 RNF150Q9ULK6 438 aa12.83□□□□□ -0.36
UBE2D3-207ENST00000394801 BOD1L1Q8NFC6 3051 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 IFNA5P01569 189 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 GLRXP35754 106 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 HTD2P86397 168 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 RBMS3Q6XE24 437 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 OR2Z1Q8NG97 314 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 OR13A1Q8NGR1 328 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 S100PBPQ96BU1 408 aa12.82□□□□□ -0.36
UBE2D3-207ENST00000394801 C15orf65H3BRN8 121 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 CRYABP02511 175 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 TFF1P04155 84 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 BRWD1-AS2P59051 145 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 CCL20P78556 96 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 CATR1Q13166 79 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 LRP11Q86VZ4 500 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 KIAA1456Q9P272 454 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 FBXO7Q9Y3I1 522 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 RAMP3O60896 148 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 ADH4P08319 380 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 ZNF83P51522 516 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 TMEM267Q0VDI3 215 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 FAM209BQ5JX69 171 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 AKR1C8PQ5T2L2 129 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 RPRMLQ8N4K4 120 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 NIT2Q9NQR4 276 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 DUSP13Q9UII6 198 aa12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-207ENST00000394801 CHD3Q12873 2000 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-207ENST00000394801 GPR37O15354 613 aa12.8□□□□□ -0.36
UBE2D3-207ENST00000394801 OR8U8P0C7N1 319 aa12.8□□□□□ -0.36
UBE2D3-207ENST00000394801 IAPPP10997 89 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms