RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PRR18Q8N4B5 295 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 UBALD1Q8TB05 177 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 APH1AQ96BI3 265 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 KIAA2026Q5HYC2 2103 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 ZNF16P17020 682 aaPredicted RBP15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 CA6P23280 308 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 NHLH1Q02575 133 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 PLP2Q04941 152 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 ACSF3Q4G176 576 aaPredicted RBP15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 LILRB2Q8N423 598 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 OR1K1Q8NGR3 316 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 OR4C12Q96R67 309 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 P2RX4Q99571 388 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 WDR61Q9GZS3 305 aaKnown RBP15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 VAX2Q9UIW0 290 aa15.51■□□□□ 0.07
PCDHA1-202ENST00000394633 FAM166BA8MTA8 275 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 CEBPZOSA8MTT3 80 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 PHOX2AO14813 284 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 HBG1P69891 147 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 HBG2P69892 147 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 SERF2P84101 59 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 TMEM41BQ5BJD5 291 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 PFDN5Q99471 154 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 KCNS2Q9ULS6 477 aa15.5■□□□□ 0.07
PCDHA1-202ENST00000394633 A0A1W2PR80 420 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 MAP1LC3B2A6NCE7 125 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 J3QT63 122 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 MAGEA5P43359 124 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 SPANXN5Q5MJ07 72 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 NUFIP2Q7Z417 695 aaKnown RBP15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 MRGPRGQ86SM5 289 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 VASH2Q86V25 355 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 MAP1LC3BQ9GZQ8 125 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 SPTBN4Q9H254 2564 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 SIRPB1O00241 398 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 DNAJC13O75165 2243 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 APLNRP35414 380 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 ELLP55199 621 aaPredicted RBP15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 FAM180AQ6UWF9 173 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 ZNF497Q6ZNH5 498 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 BEND4Q6ZU67 534 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 MYPOPQ86VE0 399 aaPredicted RBP15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 PRDM13Q9H4Q3 707 aa15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 LIN7CQ9NUP9 197 aaKnown RBP15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 RBM7Q9Y580 266 aaKnown RBP15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 DIDO1Q9BTC0 2240 aaKnown RBP15.49■□□□□ 0.07
PCDHA1-202ENST00000394633 PTBP3O95758 552 aaKnown RBP15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 PLA2G5P39877 138 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 C4orf17Q53FE4 359 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 SPATA46Q5T0L3 261 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 WDR25Q64LD2 544 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 TMPRSS7Q7RTY8 843 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 PARD6GQ9BYG4 376 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 RBKSQ9H477 322 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 B4GALT7Q9UBV7 327 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 TRBV24-1A0A075B6N3 115 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 OR2H2O95918 312 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 C3AR1Q16581 482 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 DCAF10Q5QP82 559 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 MOB1BQ7L9L4 216 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 WDR86Q86TI4 376 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 DRAM1Q8N682 238 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 TAF15Q92804 592 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 PRSS50Q9UI38 385 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 TRAPPC2LQ9UL33 140 aa15.48■□□□□ 0.07
PCDHA1-202ENST00000394633 UBE2L5PA0A1B0GUS4 154 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 OR5H1A6NKK0 313 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 TGOLN2O43493 480 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 WDR1O75083 606 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 PGA5P0DJD9 388 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 PINX1Q96BK5 328 aaKnown RBP15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 TTTY12Q9BZ98 90 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 IGKV1D-33P01593 117 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 IGKV1-33P01594 117 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 OPN1MWP04001 364 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 OPN1MW2P0DN77 364 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 OPN1MW3P0DN78 364 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 HIST1H1BP16401 226 aaKnown RBP15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 MDKP21741 143 aaPredicted RBP15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 SLC38A11Q08AI6 406 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 CTDSP1Q9GZU7 261 aa15.47■□□□□ 0.07
PCDHA1-202ENST00000394633 ZNF737O75373 536 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 IFNA1P01562 189 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 FABP4P15090 132 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 CD81P60033 236 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 RPP25LQ8N5L8 163 aaKnown RBP15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 TMEM251Q8N6I4 163 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 CDH20Q9HBT6 801 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 ATMQ13315 3056 aa15.46■□□□□ 0.07
PCDHA1-202ENST00000394633 WT1P19544 449 aaPredicted RBP15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 CEACAM6P40199 344 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 CLN3Q13286 438 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 ABHD17BQ5VST6 288 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 FGFRL1Q8N441 504 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 GP6Q9HCN6 339 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 IL18BPO95998 194 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 GPX4P36969 197 aaPredicted RBP15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 PMS2P11Q13670 270 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 OR8G2PQ6IF36 304 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 TMEM14EPQ6UXP3 125 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms