RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SPESP1Q6UW49 350 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 SCIMPQ6UWF3 145 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 SLC36A1Q7Z2H8 476 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM144Q7Z5S9 345 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TMED4Q7Z7H5 227 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 RIMKLAQ8IXN7 391 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 C20orf196Q8IYI0 205 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 DAW1Q8N136 415 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PIGXQ8TBF5 258 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 RXFP4Q8TDU9 374 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 GPR119Q8TDV5 335 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 DOK4Q8TEW6 326 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 DNAJB3Q8WWF6 145 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM230Q96A57 120 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ISOC2Q96AB3 205 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 OR7D2Q96RA2 312 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF382Q96SR6 550 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 VAT1Q99536 393 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 CMSS1Q9BQ75 279 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 LXNQ9BS40 222 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TXNIPQ9H3M7 391 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 DUSP21Q9H596 190 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ELOVL6Q9H5J4 265 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 UBE2ZQ9H832 354 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 BEX1Q9HBH7 125 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM138Q9NPI0 162 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 FBXO6Q9NRD1 293 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TUBG2Q9NRH3 451 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 RBFOX1Q9NWB1 397 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 MED29Q9NX70 200 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 ADA2Q9NZK5 511 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 MRPL27Q9P0M9 148 aaKnown RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 GSKIPQ9P0R6 139 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 UBIAD1Q9Y5Z9 338 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 TET2Q6N021 2002 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PARP14Q460N5 1801 aa1.91□□□□□ -2.1
PTPRC-205ENST00000391970 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.1
PTPRC-205ENST00000391970 ROBO1Q9Y6N7 1651 aa1.9□□□□□ -2.1
PTPRC-205ENST00000391970 ATG2AQ2TAZ0 1938 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 PATJQ8NI35 1801 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 IGLV1-50A0A075B6I6 118 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TRAV30A0A087WSZ9 112 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MEIKINA0A087WXM9 373 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 IGKV6D-21A0A0A0MT36 114 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TGIF2-C20orf24A0A0A6YYL0 155 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 IGHV5-10-1A0A0J9YXX1 117 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TRAPPC13A5PLN9 417 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR5H14A6NHG9 310 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TRAPPC2LH3BP13 241 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 CLDN34H7C241 214 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 K7ERU9 68 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 M0R036 132 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 M0R233 179 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 FAAHO00519 579 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 PDCD5O14737 125 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MYL12BO14950 172 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TGOLN2O43493 480 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 HPGDSO60760 199 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 GPR75O95800 540 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 CD160O95971 181 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 IFNA5P01569 189 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 EIF4EP06730 217 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ADRA2AP08913 450 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SMIM17P0DL12 118 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SULT1A3P0DMM9 295 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SULT1A4P0DMN0 295 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SMIM10L2AP0DMW4 78 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SMIM10L2BP0DMW5 78 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF32P17041 273 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 IGFBP3P17936 291 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ADCYAP1P18509 176 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MYL12AP19105 171 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 RPS3P23396 243 aaKnown RBP eCLIP1.9□□□□□ -2.112e-7■■■□□ 15.8
PTPRC-205ENST00000391970 KDELR1P24390 212 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 CD82P27701 267 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 BRS3P32247 399 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 POLR2IP36954 125 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 LGALS7P47929 136 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 CLDN12P56749 244 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 PFN3P60673 137 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 EIF5AP63241 154 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SLC35A2P78381 396 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 RPL19P84098 196 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 CDK6Q00534 326 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SIGLEC14Q08ET2 396 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 FABP9Q0Z7S8 132 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 RSU1Q15404 277 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SPA17Q15506 151 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 SLC9A3R2Q15599 337 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MESTQ5EB52 335 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 IDNKQ5T6J7 187 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF691Q5VV52 312 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 KHDRBS2Q5VWX1 349 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ASCL4Q6XD76 172 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 Q6ZR03 302 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MBOAT2Q6ZWT7 520 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR2W3Q7Z3T1 314 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 NIT1Q86X76 327 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms